Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S424.g08583.01.t

Possible name(s)

SERINC1; SERINC2; SERINC3

Gene model

Phmamm.CG.MTP2014.S424.g08583

Location

S424 [85,711 / 90,566]

Sequences

Amino acid sequence

Length: 411

>Phmamm.CG.MTP2014.S424.g08583.01.p
MLAPGLEAKLKEIPTFCEGGSSPVGGFVDCNVLAGFLSVYRVCFGMAGFFFLLATLMVCV
KNSKDPRAKIHNGFWFFKFLVLVGITVGAFFIPKGDFSIAWYYIGLAGAFGFILIQLVLL
VDFAHAWNDFMLEKREDGDSPRCWTILLLGSTIFNYAVCITAVVLFYIYYAFGDCSTNKA
FVSVNLILCVVVSVIAILPRVQEAQPRSGLLQPSVISMYCMYLTWSAMTSSPDKICNPPL
AEVAQNIVGGGGKLTVNGTTPSPQTDGVQFWDGQSIVGLLVFFVCVLYSSIRSSTQSNVD
RLTFHENVVLDDNDGDKDVLVKDAEEGGQKIYDNEQESVAYSYSFFHLMFFLASLYIMMT
LTNWYRPDEDFKTMQHSLPAMWVKISSSWICFALYVWTLVAPIVLSNRSFE

Nucleotide sequence

Length: 1,236

>Phmamm.CG.MTP2014.S424.g08583.01.t
ATGCTTGCTCCAGGTTTAGAAGCTAAACTGAAAGAGATACCCACATTCTGCGAAGGTGGA
AGCTCCCCAGTGGGTGGATTTGTGGATTGTAATGTCCTTGCTGGTTTTCTCTCTGTGTAC
AGGGTTTGCTTTGGAATGGCTGGCTTCTTTTTCTTGCTGGCAACTCTTATGGTATGTGTT
AAGAACAGCAAAGATCCCCGTGCAAAGATACATAATGGGTTTTGGTTCTTCAAATTTCTT
GTCCTGGTTGGGATCACAGTTGGAGCCTTTTTCATTCCGAAAGGGGATTTTAGTATTGCA
TGGTATTACATTGGATTGGCAGGGGCATTTGGATTCATATTAATCCAGCTCGTACTGTTG
GTTGATTTTGCCCATGCCTGGAACGACTTTATGCTGGAAAAGAGAGAAGATGGAGATTCT
CCACGCTGTTGGACTATTTTGCTTCTGGGGTCTACAATTTTCAACTATGCTGTTTGCATC
ACTGCAGTGGTGCTTTTCTACATCTACTATGCTTTTGGTGATTGTAGTACCAACAAGGCT
TTTGTCAGTGTCAACCTAATCCTCTGTGTGGTGGTGTCAGTGATTGCTATTCTACCTCGT
GTACAGGAAGCCCAACCACGCAGTGGCTTGCTTCAGCCTTCAGTGATCTCCATGTACTGC
ATGTACCTTACCTGGTCAGCTATGACAAGCAGTCCTGACAAAATCTGCAACCCACCTCTT
GCAGAAGTTGCACAGAACATAGTGGGTGGTGGAGGAAAGTTGACTGTGAATGGTACAACC
CCTTCTCCACAGACTGATGGAGTTCAGTTCTGGGACGGGCAAAGCATTGTTGGCTTGTTG
GTTTTCTTTGTTTGTGTGCTTTACTCAAGCATCCGTTCTTCAACCCAAAGCAATGTGGAC
AGGCTCACCTTTCATGAGAATGTAGTGCTGGATGATAATGATGGTGACAAGGATGTTTTG
GTGAAAGATGCTGAAGAAGGTGGTCAGAAGATTTACGACAACGAACAGGAATCTGTGGCT
TATTCCTACTCCTTCTTTCATCTCATGTTCTTTCTTGCTTCTCTCTACATTATGATGACA
CTTACCAACTGGTATAGACCTGATGAGGATTTTAAAACAATGCAACACTCGCTTCCTGCG
ATGTGGGTGAAAATATCCTCCAGTTGGATTTGTTTTGCTCTGTATGTGTGGACCCTGGTA
GCACCAATTGTCCTCAGCAACCGATCGTTTGAATAA

InterProScan

Pfam	TDE1/TMS (IPR005016) - T[1-408] 1.3E-149
PANTHER	TDE1/TMS (IPR005016) - T[1-410] 3.0E-161

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SERC3_HUMAN	51.773 %	417	1.28E-143
SERC2_HUMAN	48.921 %	360	1.2E-121
SERC1_HUMAN	53.735 %	420	2.55E-145