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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L37.5.v4.A...' > 
  2. Clone 'ma207p09' > 
  3. Transcript 'KH2012:KH.C12.278.v1...' > 
  4. Transcript 'KH2012:KH.L37.5.v4.A...' > 
  5. Transcript 'Phmamm.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S427.g08614.01.t

Possible name(s)

CHAT; ITGB1; ITGB7

Gene model

Phmamm.CG.MTP2014.S427.g08614

Location

S427 [69,261 / 76,690]

Sequences

Amino acid sequence

Length: 699

>Phmamm.CG.MTP2014.S427.g08614.01.p
GSLRNKTMTRRGSKKIMEAASKLQYPTPSSPSEVTLPKLPVPDLQETLDQYLLCVRPLVN
EGQFEQTKRKVDEFGSAGGIGEKIQHKLIQHAEKQENWAYEWWLNDMYLDARVPLPVNSN
PGMVLPKQDFKDESSMLRYASKLVSGILDFKVILDARALPVDVARGQLAGQPLCMEQYYR
LLTSYRLPGYGRDQLVTVNPNPSEQAEHIIVMCNNQLFVVPISEGNRRLTEADFYVQLEL
IMRNGNNCSGMNSPIGVLTSLNRNDWAEARELLMKDHVNRLSLDAVERSIFILCLDRSTN
ANSDVTVAHQMLYGSGPKLNSCNRWYDKTIQLIISTDGNVGLSYEHSASEGIAVTALIEH
LIKYVSIQETKGLYRSDSMKTLTPPQHLKWKITDATSKFIQMAQSCAVEMSENLDLTVMR
FDDYGKNFIKRQNISPDAFVQVALQVAYYKIYQRLVSTYESASTRRFQKGRVDNIRAASI
QALDFAKALFEPEDGTKTTDAKQMLLLRRAVKTQTDITIAAISGHGIDCHLLALKKMAEE
MGFPVPEIFSDPSYPLTNYFQLSTSQIPTKTDSFMCYGAVVPDGYGVSYNPHGDSITFCI
SSFRTCPSTCSEKFGNALRESMLTMKDICQQWNKRRSSSLVVEPAEHLVTPKKLPLHRPI
NVRHFSSEDDTLREEKPGDMAAESKAALLRNLKRRTSFT

Nucleotide sequence

Length: 2,099

>Phmamm.CG.MTP2014.S427.g08614.01.t
GGGTCATTAAGAAACAAAACAATGACAAGAAGGGGAAGCAAAAAGATTATGGAGGCAGCA
TCAAAGCTTCAATACCCGACTCCGAGTTCACCTTCGGAGGTGACTCTTCCCAAACTTCCC
GTCCCGGATCTCCAAGAAACCCTGGATCAGTATCTTCTCTGCGTCCGTCCTCTCGTCAAC
GAAGGTCAGTTCGAACAGACAAAGAGAAAGGTCGATGAGTTTGGAAGCGCTGGTGGAATT
GGAGAAAAAATCCAACATAAATTGATTCAACATGCAGAGAAACAGGAAAACTGGGCTTAC
GAATGGTGGCTCAACGACATGTATTTGGATGCTCGGGTGCCTTTGCCTGTCAACTCAAAT
CCCGGGATGGTTCTGCCTAAGCAAGACTTCAAAGATGAAAGTAGCATGTTGAGGTATGCC
TCAAAGTTGGTGTCAGGAATTTTGGATTTTAAAGTAATTTTGGACGCGAGGGCGTTGCCG
GTAGATGTCGCTCGCGGACAATTAGCAGGTCAACCTCTCTGCATGGAGCAATATTATCGC
TTGCTCACGTCATACCGGTTGCCGGGATACGGAAGAGATCAACTTGTGACAGTAAATCCT
AACCCAAGTGAGCAGGCAGAGCACATCATCGTTATGTGTAACAACCAGCTTTTTGTAGTT
CCAATAAGCGAGGGAAATCGGCGACTTACCGAAGCTGATTTCTATGTCCAATTGGAATTA
ATCATGCGAAACGGAAATAACTGTAGCGGAATGAACTCTCCGATCGGCGTATTGACTTCG
CTCAACCGCAACGACTGGGCCGAAGCCAGGGAACTTCTCATGAAAGATCACGTAAACCGG
TTGTCTTTGGATGCAGTGGAACGCAGCATATTTATTCTCTGTCTTGACAGATCCACTAAC
GCCAATAGTGACGTCACTGTTGCCCATCAGATGCTGTATGGAAGCGGGCCGAAATTAAAT
AGCTGCAACAGGTGGTACGACAAAACCATCCAGTTGATTATCAGTACTGATGGAAATGTC
GGTTTGTCTTACGAACACTCGGCATCAGAAGGTATTGCAGTGACCGCCCTGATAGAACAC
CTCATCAAATATGTGTCTATTCAAGAGACGAAAGGACTGTACCGATCCGATTCTATGAAA
ACTTTAACTCCTCCACAGCACCTCAAGTGGAAAATTACCGACGCAACTTCAAAATTTATT
CAAATGGCGCAGTCGTGCGCCGTGGAAATGTCAGAAAACTTGGACTTGACCGTGATGCGT
TTTGATGATTATGGAAAGAATTTTATCAAGAGGCAAAATATCAGCCCTGATGCTTTCGTA
CAAGTTGCGTTGCAGGTGGCTTATTACAAAATCTATCAACGTCTCGTTTCAACATACGAA
AGCGCATCAACACGAAGATTTCAGAAAGGGAGAGTTGACAATATACGCGCTGCAAGTATT
CAAGCTCTTGATTTCGCCAAAGCCTTGTTTGAACCTGAGGATGGCACAAAAACCACGGAC
GCCAAGCAAATGTTGCTTCTCCGCCGAGCTGTCAAAACTCAGACTGACATAACGATTGCA
GCCATCTCTGGCCACGGAATTGATTGCCATTTACTGGCTCTTAAAAAGATGGCAGAGGAG
ATGGGTTTTCCTGTGCCCGAAATCTTCAGCGATCCGTCGTACCCACTTACCAACTATTTT
CAACTCTCTACGAGTCAGATCCCAACAAAAACCGATTCCTTCATGTGTTATGGGGCAGTT
GTCCCTGATGGCTACGGCGTATCTTACAATCCCCATGGCGATTCTATCACCTTCTGTATA
TCATCCTTCCGAACTTGCCCGAGCACTTGTTCGGAAAAGTTCGGAAATGCTTTGCGCGAA
TCGATGCTTACCATGAAAGATATCTGTCAGCAATGGAACAAACGAAGATCATCCAGTTTA
GTTGTTGAACCTGCAGAGCACCTGGTTACGCCCAAGAAACTCCCCCTGCATCGTCCAATC
AACGTGCGGCATTTTTCTTCGGAAGACGACACCTTGCGCGAAGAGAAACCCGGAGATATG
GCTGCAGAGAGCAAGGCTGCTTTGTTGAGAAATTTGAAAAGAAGAACAAGTTTTACTAG

InterProScan

PANTHER
Carn_acyl_trans (IPR000542) - T[19-638] 1.3E-266
ProSitePatterns
Carn_acyl_trans (IPR000542) - T[36-51] . - T[324-351] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CPT2_HUMAN 29.953 % 274 1.37E-82
CACP_HUMAN 42.834 % 495 5.45E-168
CLAT_HUMAN 47.619 % 604 0