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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S6...' > 
  2. Transcript 'Boleac.CG.SB_v3.S116...' > 
  3. Transcript 'KH2012:KH.C5.134.v2....' > 
  4. Transcript 'KH2012:KH.C5.166.v2....' > 
  5. Transcript 'Phmamm.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S42.g01641.01.t

Possible name(s)

STX10; STX6

Gene model

Phmamm.CG.MTP2014.S42.g01641

Location

S42 [221,574 / 225,674]

Sequences

Amino acid sequence

Length: 232

>Phmamm.CG.MTP2014.S42.g01641.01.p
MSVEDPFFVVRGEVERSVNACRELQQRWRYMLDDSSALKRDDYDRVSNELRNSLRSIDSG
VGVCISLNLVIRIVESNPHKFHISPGELDTRKGFIQNTRNNIQDMKNELNDPAVKAKADK
ILRKSLLQNGISNHNKNNYDRYSKLKQSMENDNAGFIEDQHQKQQLIIEQQDDQLDLVAD
SVGILKNMSKTIGGELDDQVIMLDELGHEMENTQNRMDSMLRKMAQVTHMNS

Nucleotide sequence

Length: 696

>Phmamm.CG.MTP2014.S42.g01641.01.t
ATGTCTGTTGAAGACCCATTTTTTGTTGTGAGAGGAGAGGTAGAAAGATCCGTAAACGCT
TGTCGGGAATTGCAGCAGAGGTGGAGATACATGTTGGATGACAGCTCAGCGTTAAAACGT
GACGATTACGACCGAGTTAGCAACGAATTGCGCAACAGTCTTCGGAGTATAGATTCCGGT
GTGGGTGTGTGTATTTCTCTTAACCTTGTCATACGAATTGTTGAGTCGAATCCCCACAAG
TTTCACATTTCACCCGGAGAGTTGGATACAAGGAAAGGCTTCATACAAAATACAAGAAAC
AATATCCAAGATATGAAGAATGAACTGAATGACCCTGCAGTAAAAGCAAAAGCCGACAAA
ATATTACGCAAGAGTTTGTTACAAAATGGAATTTCAAATCATAACAAGAATAATTACGAC
CGATATTCAAAATTAAAGCAATCAATGGAAAATGACAACGCGGGTTTTATCGAAGATCAA
CATCAAAAACAGCAGCTGATCATTGAACAACAGGACGACCAACTAGATCTTGTTGCGGAC
AGCGTCGGAATTTTAAAAAACATGTCAAAAACAATAGGTGGTGAATTGGACGATCAAGTT
ATTATGTTGGATGAATTGGGACATGAAATGGAAAATACACAAAACCGAATGGATTCTATG
TTGAGGAAAATGGCACAAGTTACCCACATGAACAGC

InterProScan

SUPERFAMILY
SNARE (IPR010989) - T[4-111] 1.26E-21
Pfam
Syntaxin-6_N (IPR015260) - T[5-106] 5.4E-23
SMART
T_SNARE_dom (IPR000727) - T[160-227] 7.7E-5
ProSiteProfiles
T_SNARE_dom (IPR000727) - T[165-227] 13.783

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
STX6_HUMAN 46.352 % 226 1.99E-74
STX10_HUMAN 42.672 % 187 1.64E-59