- Transcript 'Phmamm.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S436.g08706.01.t
Possible name(s)
ADGRB2; ADGRB3; HMCN1
Gene model
Location
S436 [96,240 / 101,894]
Amino acid sequence
Length: 695
>Phmamm.CG.MTP2014.S436.g08706.01.p
MHHVFLVFAAFLAVGIPICSTLQLGAKCGKDGRWVGWFNADSPIGDGDFETLPNIRKAYG
SQGCDKPQDIKVRMVTSKGSRKPTEVIFFGVEFGMQCLVKDNNGTCKDYEIALCCPGVIG
NPNVGRSHDGYECLLAKVLTENGIPDNFQCTDPCDEKSEIAKTQADCGNYSHCRWENDTC
KSNRFPVAALNNGNAGDFIEDATGVEVEPTVEGRLFGITELECKIMGGCYVNNLCYYPPS
SNQIQLRAGEDPLIGPNPTGRDLYGQPQCLPFDPNGSASSILDSYHSCRMAGCVMDPSFD
AAKIRSYLCDIVKSDAVPVNLKKPFWDQVLQGIIGPHNWRQALQKLLVNICPNPYANNPL
NSLFQNGGLAIPILEGCQSYLEYLGVNNNNNNYENPYTTPNPFSFLNSMFNNINEGVGTP
GGVGGAGGASFFPPGPYFPSYQPQCPFQPYSIQGFNPLQGRFDGCCERHYCYVPRAQARS
VQSGVSLYLSFWSNWGPCSASCGGGTRKQTRICVANDNQSGCEGSLEKVEVCGEAQCPYW
DNWGSWLACSRECGGGQQKRTRQCLPSDTGCSGPSEESQTCNECTCPTFSAFSSWTLCSV
SVGCGIQTRDRTCTDAGTCSLGCNTIPTALQETKSCKIYCGDAVETKSDCRGSFLTGCFQ
YVTRECLCASATPDCDPCHDYVASQRIPCWCPLGK
Nucleotide sequence
Length: 2,088
>Phmamm.CG.MTP2014.S436.g08706.01.t
ATGCATCACGTCTTCCTCGTTTTCGCTGCTTTCTTGGCCGTTGGAATCCCAATATGCTCG
ACACTACAGTTGGGCGCTAAATGTGGTAAAGATGGTCGCTGGGTGGGGTGGTTCAACGCG
GATTCGCCAATCGGGGATGGCGACTTCGAGACTCTACCTAACATTAGAAAAGCCTATGGA
AGTCAAGGATGCGACAAGCCACAAGACATTAAGGTGCGAATGGTCACCTCGAAGGGAAGC
AGAAAACCAACCGAAGTGATCTTCTTTGGTGTGGAGTTCGGTATGCAATGCTTGGTGAAA
GACAACAATGGAACTTGCAAAGACTATGAAATTGCTCTTTGCTGCCCCGGAGTGATCGGA
AATCCTAATGTCGGCCGCAGTCATGATGGTTACGAATGTTTGTTGGCGAAGGTACTCACT
GAAAACGGAATACCTGACAACTTTCAGTGCACCGACCCGTGCGACGAAAAGAGCGAAATA
GCTAAGACACAAGCAGACTGTGGAAACTATTCTCACTGCAGATGGGAAAATGACACGTGC
AAAAGCAACAGATTTCCAGTGGCTGCTCTAAACAACGGCAATGCTGGTGATTTTATCGAG
GATGCAACCGGTGTGGAAGTTGAACCAACGGTTGAAGGAAGACTGTTTGGTATTACAGAG
TTGGAGTGCAAGATCATGGGTGGCTGTTACGTAAACAACTTATGCTACTATCCTCCCAGT
TCTAACCAAATTCAACTTCGAGCCGGTGAGGATCCTTTGATCGGTCCGAACCCCACAGGG
CGTGATTTGTATGGACAACCCCAATGTTTGCCATTTGACCCCAACGGTTCTGCCTCCAGT
ATTCTGGATAGCTATCACAGTTGCCGTATGGCCGGATGTGTTATGGATCCCTCATTCGAT
GCGGCAAAAATACGCTCATACCTTTGTGACATTGTTAAGAGCGATGCAGTACCAGTTAAC
CTGAAGAAGCCGTTTTGGGATCAGGTTCTTCAAGGCATCATTGGACCACACAACTGGAGA
CAAGCACTTCAAAAGCTTCTGGTTAACATTTGCCCCAACCCCTATGCAAATAACCCGTTA
AACAGTCTTTTCCAAAATGGCGGGTTAGCCATTCCCATTCTTGAAGGTTGTCAATCATAT
CTCGAATACTTAGGAGTAAACAACAACAACAATAACTACGAAAATCCATATACCACTCCT
AATCCTTTTAGCTTTTTAAACTCAATGTTTAACAACATAAACGAAGGAGTTGGTACACCC
GGAGGAGTCGGGGGAGCTGGTGGGGCCAGTTTTTTCCCTCCTGGGCCATATTTTCCATCG
TATCAACCCCAGTGTCCTTTCCAGCCTTACAGTATACAGGGCTTCAACCCGCTTCAGGGG
CGCTTCGACGGTTGCTGTGAACGTCATTACTGTTACGTACCGCGTGCCCAGGCGAGAAGT
GTCCAGTCTGGCGTCTCATTATACCTCAGCTTCTGGAGCAACTGGGGTCCATGTTCTGCA
AGTTGCGGCGGGGGAACACGAAAGCAAACCAGAATCTGCGTTGCGAATGATAACCAAAGC
GGATGCGAAGGCTCCCTTGAGAAAGTTGAAGTGTGCGGCGAAGCTCAATGCCCGTATTGG
GACAACTGGGGTTCTTGGCTCGCGTGCAGTAGAGAGTGTGGAGGCGGACAACAAAAACGA
ACCCGCCAGTGTTTGCCTTCCGACACCGGGTGTTCTGGCCCAAGTGAGGAATCCCAGACC
TGCAACGAATGCACTTGTCCCACGTTTAGCGCATTCAGCTCTTGGACCTTATGCAGCGTG
TCAGTGGGTTGCGGCATTCAAACTCGGGACCGCACATGCACAGACGCAGGGACATGTTCT
TTGGGCTGTAACACAATACCAACAGCACTTCAAGAAACAAAATCGTGCAAAATTTACTGC
GGAGATGCTGTTGAAACGAAGTCAGACTGTAGAGGCAGCTTTTTGACAGGATGCTTTCAA
TATGTCACAAGGGAATGCCTTTGCGCAAGTGCAACACCCGATTGCGACCCATGCCACGAC
TACGTCGCATCACAACGGATCCCTTGTTGGTGTCCGTTAGGAAAATAG
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[485-538] 3.8E-12 - T[539-586] 1.1E-7 - T[588-651] 3.6E-5 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[486-536] 10.254 - T[537-587] 11.957 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[488-532] 2.62E-10 - T[537-582] 6.8E-9 - T[586-636] 9.16E-6 |
| SMART |
TSP1_rpt (IPR000884) - T[489-538] 2.0E-8 - T[540-587] 6.1E-6 - T[589-641] 0.022 |
| Pfam |
TSP1_rpt (IPR000884) - T[490-537] 2.8E-8 - T[542-586] 9.2E-4 - T[590-636] 0.045 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 41.912 % | 94.4 | 1.12E-19 |
| AGRB2_HUMAN | 36.774 % | 94.7 | 6.65E-20 |
| AGRB3_HUMAN | 38.65 % | 96.3 | 2.11E-20 |