- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C2.125.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S439.g08747.01.t
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
S439 [67,075 / 70,768]
Amino acid sequence
Length: 378
>Phmamm.CG.MTP2014.S439.g08747.01.p
MSDSEEDQTALVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE
AQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANRE
KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDAGDGVSHNVPIYEGYALPHAIAR
LDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSTSLE
KSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN
VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
TKQEYDEAGPSIVHRKCF
Nucleotide sequence
Length: 1,137
>Phmamm.CG.MTP2014.S439.g08747.01.t
ATGTCAGACTCCGAAGAAGATCAAACCGCACTCGTCTGCGACAACGGATCAGGATTGGTG
AAATCCGGATTCGCTGGGGATGACGCACCAAGAGCTGTCTTCCCATCTATTGTCGGACGA
CCAAGACATCAGGGCGTTATGGTCGGTATGGGACAAAAAGACAGCTACGTTGGCGACGAA
GCCCAGAGCAAACGTGGTATCCTTACCCTGAAATACCCCATCGAGCATGGCATCATCACC
AACTGGGATGATATGGAGAAGATCTGGCATCACACCTTCTACAACGAGCTCCGTGTTGCA
CCAGAAGAGCACCCAACCCTTCTCACCGAGGCCCCACTTAACCCTAAAGCTAACCGTGAA
AAGATGACCCAGATCATGTTCGAGACTTTCAATGTGCCAGCCATGTACGTTGCTATCCAA
GCCGTGCTCTCACTGTATGCTTCTGGCAGAACCACAGGTATTGTCCTCGATGCCGGTGAT
GGTGTTTCCCACAACGTGCCCATCTACGAAGGATACGCGCTCCCTCACGCCATCGCGCGG
TTGGATTTAGCCGGTCGTGACTTGACTGACTACCTCATGAAAATTCTCACTGAGCGTGGA
TACTCCTTTGTCACAACTGCTGAGCGTGAAATTGTTCGTGACATCAAGGAGAAACTCTGC
TACGTCGCTTTGGACTTCGAGCAAGAAATGGCAACCGCCGCTTCTAGCACATCCCTTGAG
AAGAGCTATGAACTTCCTGACGGTCAAGTTATCACCATTGGCAACGAACGATTCCGATGC
CCTGAGACTCTTTTCCAGCCATCATTTATTGGAATGGAATCCGCTGGCATTCACGAGACA
ACATACAACTCCATCATGAAGTGCGATATTGACATCCGCAAGGATCTGTACGCCAACAAC
GTCCTCTCTGGTGGAACCACCATGTATCCTGGTATCGCCGACAGGATGCAGAAAGAGATC
ACTGCTCTTGCTCCCAGCACCATGAAGATCAAAATCATTGCTCCTCCAGAGAGGAAGTAC
TCCGTCTGGATTGGAGGTTCAATCCTTGCATCCTTGTCTACCTTCCAGCAAATGTGGATC
ACCAAGCAGGAGTACGATGAAGCCGGTCCCTCTATCGTCCACAGAAAGTGCTTCTAA
| PANTHER |
Actin (IPR004000) - T[5-377] 8.9E-267 |
| Pfam |
Actin (IPR004000) - T[7-378] 2.7E-147 |
| SMART |
Actin (IPR004000) - T[8-378] 1.4E-232 |
| PRINTS |
Actin (IPR004000) - T[29-38] 1.8E-57 - T[52-63] 1.8E-57 - T[64-86] 1.8E-57 - T[118-131] 1.8E-57 - T[143-162] 1.8E-57 - T[239-255] 1.8E-57 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[56-66] . - T[359-367] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[107-119] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 97.326 % | 767 | 0 |
| ACTS_HUMAN | 97.326 % | 767 | 0 |
| ACTC_HUMAN | 97.09 % | 767 | 0 |