- Transcript 'Phmamm.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S442.g08781.01.t
Possible name(s)
ACTA2; ACTB; ACTG1
Gene model
Location
S442 [9,680 / 12,732]
Amino acid sequence
Length: 368
>Phmamm.CG.MTP2014.S442.g08781.01.p
MSIIIDNGSGICKAGFAGDDAPKTAFPSIVGSPRQNDFRQARTEGYIGDEAQKIRGRLLI
NHPIEHGHITNWKDMEKIWSHVFYSELRVDPQQYPIFLTEAPLNSEVNREKMAQVMFETF
GTSKTYIGLQPVLVLYASGRTTGLVVDSGEGVSHAVPILDGYAMPHTINRINFAGRDLTD
HLVKLLMKTGYSFPQPAMREFVRHMKETLSYVALDFQQEMQTASASSFGEKLYELPDGQV
VHMGSERFQCPEALFHPGLADMDCQGNHKIGCVSIEKSEADLRRDLFANTVLAGGSTMFP
GFAERLEKEMSAHAPGNMKIKVAAHPKRKHSVWLGGSILATISSFQSMWVTKEEYNDSGP
SIVHRKCF
Nucleotide sequence
Length: 1,107
>Phmamm.CG.MTP2014.S442.g08781.01.t
ATGTCGATCATTATTGACAATGGCTCAGGTATATGTAAAGCTGGATTTGCAGGTGATGAT
GCACCAAAGACTGCGTTTCCATCTATTGTAGGAAGCCCAAGACAAAATGACTTCAGGCAG
GCACGAACGGAGGGGTACATCGGCGATGAAGCTCAGAAAATACGTGGAAGGCTCCTTATT
AATCATCCAATTGAGCACGGTCACATTACCAACTGGAAAGACATGGAGAAAATATGGAGC
CATGTGTTCTATAGTGAACTGCGTGTTGACCCCCAGCAATATCCAATTTTCCTCACTGAG
GCCCCGTTAAATTCGGAAGTAAACCGAGAGAAAATGGCTCAAGTTATGTTCGAGACATTT
GGAACATCTAAAACGTACATTGGTTTGCAGCCTGTTCTTGTTCTTTACGCCTCAGGACGA
ACCACAGGCTTAGTTGTGGACAGTGGTGAGGGGGTGTCGCATGCTGTTCCTATTTTGGAT
GGATACGCCATGCCTCACACCATCAACCGGATAAATTTCGCTGGTCGCGACTTGACTGAT
CATCTCGTAAAACTTCTCATGAAGACAGGGTATTCATTTCCGCAGCCCGCTATGCGTGAA
TTCGTGAGACATATGAAAGAAACATTGTCCTACGTTGCTCTGGACTTTCAACAAGAAATG
CAAACAGCTTCCGCCAGTAGTTTTGGCGAGAAACTCTACGAGCTTCCAGACGGTCAGGTG
GTTCATATGGGGAGCGAACGATTTCAATGTCCAGAAGCTCTGTTTCATCCAGGTTTGGCC
GATATGGATTGTCAAGGTAACCATAAAATTGGTTGCGTCTCCATCGAAAAGTCCGAGGCT
GATTTACGCAGAGATTTGTTCGCCAACACTGTGCTTGCCGGGGGTAGCACAATGTTCCCA
GGCTTTGCTGAACGTTTGGAAAAAGAGATGTCTGCCCATGCTCCAGGCAATATGAAGATT
AAGGTCGCTGCTCATCCTAAGCGGAAACACTCTGTATGGCTTGGTGGTTCGATCCTAGCA
ACTATCTCCTCGTTTCAATCGATGTGGGTCACAAAAGAAGAGTATAACGATTCTGGACCC
AGCATTGTACATCGCAAATGCTTTTAG
| Pfam |
Actin (IPR004000) - T[2-368] 8.6E-122 |
| SMART |
Actin (IPR004000) - T[2-368] 2.9E-167 |
| PANTHER |
Actin (IPR004000) - T[3-367] 3.9E-171 |
| PRINTS |
Actin (IPR004000) - T[21-30] 9.8E-39 - T[42-53] 9.8E-39 - T[54-76] 9.8E-39 - T[108-121] 9.8E-39 - T[133-152] 9.8E-39 - T[229-245] 9.8E-39 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[349-357] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTG_HUMAN | 61.247 % | 500 | 1.68E-178 |
| ACTB_HUMAN | 60.976 % | 499 | 2.36E-178 |
| ACTA_HUMAN | 59.892 % | 488 | 6.78E-174 |