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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C11.299.v1...' > 
  2. Transcript 'Boleac.CG.SB_v3.S467...' > 
  3. Transcript 'Moocul.CG.ELv1_2.S62...' > 
  4. Transcript 'Phmamm.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S4439.g18405.01.t

Possible name(s)

RDH12; RDH13; RDH14

Gene model

Phmamm.CG.MTP2014.S4439.g18405

Location

S4439 [2,279 / 5,187]

Sequences

Amino acid sequence

Length: 308

>Phmamm.CG.MTP2014.S4439.g18405.01.p
MSKLPKPVSAEGSWVKCDVKLPGKTVIITGANTGIGFWTAVDLVKREAKVIIACRNAEKA
QEAKDKIIEEAKCPDKKVVVKSLDLSSFASIRQFAEDINNTEERLDILINNAGVMLCPEG
KTEDGFETQFGVNHLGHFLLTNLLIDLIKKSAPSRIVVLSSLGHKFGSMNFDDLNSSKNY
DAWAAYGQSKLANILFCRHLATQLQGTGVTVNSVHPGSVKTDLQRHLDTPGNFFMKTAVK
LHRWIMSWKTAEHGAQTSIYCAIAPELADVTGRYFSDCHVENESNAAKNDADAEKLWNIS
IELTKLNA

Nucleotide sequence

Length: 927

>Phmamm.CG.MTP2014.S4439.g18405.01.t
ATGAGCAAACTTCCAAAACCAGTCAGTGCTGAAGGAAGTTGGGTGAAATGTGATGTGAAG
TTACCAGGGAAGACTGTAATAATAACTGGAGCAAATACTGGCATTGGTTTTTGGACTGCT
GTTGATCTAGTGAAACGTGAGGCAAAAGTAATCATTGCCTGTCGGAATGCTGAAAAGGCT
CAAGAAGCCAAAGATAAGATCATTGAAGAAGCAAAGTGTCCTGATAAAAAGGTTGTTGTT
AAAAGTCTCGACCTCTCTAGTTTCGCATCAATCAGACAATTTGCTGAAGATATAAATAAC
ACAGAAGAGAGGCTTGACATACTCATTAATAATGCAGGAGTTATGCTTTGCCCTGAAGGC
AAGACTGAAGATGGATTTGAAACACAGTTTGGTGTTAATCACCTTGGACATTTTCTTCTT
ACAAATTTGCTGATAGACTTGATTAAGAAAAGTGCACCCAGTCGAATTGTTGTTCTCAGT
TCTCTTGGACACAAGTTTGGTTCCATGAACTTTGATGACTTGAATTCTAGCAAGAACTAT
GATGCATGGGCAGCTTACGGACAGAGCAAACTGGCTAACATTCTTTTCTGTAGACACTTG
GCAACACAGTTGCAAGGCACTGGGGTAACTGTTAACAGTGTCCACCCAGGCTCAGTAAAG
ACAGACTTGCAGCGTCATCTTGATACACCTGGAAATTTCTTTATGAAAACTGCTGTCAAA
CTTCATCGCTGGATCATGAGCTGGAAAACTGCTGAACATGGAGCACAGACTTCAATATAT
TGTGCCATTGCGCCTGAACTTGCTGATGTGACTGGAAGATATTTCAGCGATTGTCATGTT
GAAAATGAATCAAATGCTGCCAAGAATGATGCTGATGCAGAGAAACTGTGGAACATCAGC
ATTGAACTGACCAAACTGAATGCATGA

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[21-280] 3.12E-62
Pfam
SDR_fam (IPR002347) - T[24-227] 4.7E-35
PRINTS
SDR_fam (IPR002347) - T[25-42] 1.5E-18 - T[103-114] 1.5E-18 - T[148-164] 1.5E-18 - T[186-205] 1.5E-18 - T[207-224] 1.5E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH13_HUMAN 51.557 % 263 4.94E-87
RDH14_HUMAN 51.903 % 271 3.08E-90
RDH12_HUMAN 50.853 % 263 2.77E-87