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  1. Transcript 'Phmamm.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S447.g08846.02.t

Possible name(s)

RAB11A; RAB11B; RAB6A

Gene model

Phmamm.CG.MTP2014.S447.g08846

Location

S447 [78,088 / 80,090]

Sequences

Amino acid sequence

Length: 252

>Phmamm.CG.MTP2014.S447.g08846.02.p
MTCNSFFRETPASPNNIIKLVVIGDSGAGKSQLVSRFVRDQFCEEPEATVGLDFAVKTVK
VGDKVIRVQIWDLAGKNMFRNLTSSYYREAAAALVVYDITKVRSFENASRWIKDLRSYSG
CDVTMLVGNKLDLRHQRSIPSAEGIKLAKEQGAMFIETSAKDSTHVRKAFHRLVEQASDT
LAKKKQLEYGVENGGGLQHGSDALNVTRPKEVPQVTVVQQQPKKENYTFRRVAQTCLTNT
KDACGRMPCCFY

Nucleotide sequence

Length: 759

>Phmamm.CG.MTP2014.S447.g08846.02.t
ATGACGTGCAACTCTTTCTTTCGCGAAACACCTGCGTCCCCAAATAACATTATTAAATTG
GTCGTAATTGGAGATTCAGGTGCGGGAAAGTCCCAACTTGTGTCTCGTTTTGTTCGCGAT
CAATTCTGTGAAGAACCGGAAGCAACTGTGGGTTTGGATTTTGCTGTGAAAACAGTCAAG
GTCGGCGACAAGGTCATACGCGTGCAAATATGGGACTTGGCGGGCAAAAATATGTTCAGA
AATTTGACCTCCTCATATTATCGCGAAGCGGCTGCGGCGTTGGTTGTGTATGACATCACA
AAGGTACGCTCGTTCGAAAACGCATCGCGTTGGATCAAAGACCTTCGAAGTTACAGCGGC
TGTGACGTAACAATGCTGGTTGGCAACAAACTTGACCTACGTCACCAGCGCTCAATCCCA
TCAGCGGAAGGCATAAAGCTGGCAAAGGAGCAGGGAGCTATGTTTATTGAAACATCGGCT
AAAGACTCGACACACGTTAGAAAAGCATTTCACCGCTTGGTGGAGCAAGCGAGCGACACT
CTTGCGAAGAAGAAACAGCTTGAATATGGAGTGGAAAACGGCGGTGGGTTGCAGCATGGT
TCGGACGCTCTTAATGTCACAAGACCAAAAGAGGTTCCACAAGTAACTGTCGTTCAGCAA
CAACCGAAAAAAGAAAACTATACTTTCCGCAGAGTAGCGCAAACGTGCTTGACAAATACT
AAGGACGCATGCGGGCGAATGCCATGTTGTTTCTATTAG

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[14-181] 1.41E-49
TIGRFAM
Small_GTP-bd_dom (IPR005225) - T[16-171] 7.6E-26
Pfam
Small_GTPase (IPR001806) - T[19-177] 3.9E-52

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RB11A_HUMAN 47.059 % 171 3.24E-53
RB11B_HUMAN 46.471 % 169 2.22E-52
RAB25_HUMAN 40.449 % 154 8.44E-47