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TRANSCRIPT CARD

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  1. EST 'FF933412.1' > 
  2. Transcript 'Phmamm.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S447.g08846.03.t

Possible name(s)

RAB11A; RAB11B; RAB6A

Gene model

Phmamm.CG.MTP2014.S447.g08846

Location

S447 [78,122 / 80,097]

Sequences

Amino acid sequence

Length: 243

>Phmamm.CG.MTP2014.S447.g08846.03.p
RNMTCNSFFRETPASPNNIIKLVVIGDSGAGKSQLVSRFVRDQFCEEPEATVGLDFAVKT
VKVGDKVIRVQIWDLAGKNMFRNLTSSYYREAAAALVVYDITKVRSFENASRWIKDLRSY
SGCDVTMLVGNKLDLRHQRSIPSAEGIKLAKEQGAMFIETSAKDSTHVRKAFHRLVEQAS
DTLAKKKQLEYGVENGGGLQHGSDALNVTRPKEVPQVTVVQQQPKKENYTFRRVAQTCLT
NTK

Nucleotide sequence

Length: 732

>Phmamm.CG.MTP2014.S447.g08846.03.t
CCGAAATATGACGTGCAACTCTTTCTTTCGCGAAACACCTGCGTCCCCAAATAACATTAT
TAAATTGGTCGTAATTGGAGATTCAGGTGCGGGAAAGTCCCAACTTGTGTCTCGTTTTGT
TCGCGATCAATTCTGTGAAGAACCGGAAGCAACTGTGGGTTTGGATTTTGCTGTGAAAAC
AGTCAAGGTCGGCGACAAGGTCATACGCGTGCAAATATGGGACTTGGCGGGCAAAAATAT
GTTCAGAAATTTGACCTCCTCATATTATCGCGAAGCGGCTGCGGCGTTGGTTGTGTATGA
CATCACAAAGGTACGCTCGTTCGAAAACGCATCGCGTTGGATCAAAGACCTTCGAAGTTA
CAGCGGCTGTGACGTAACAATGCTGGTTGGCAACAAACTTGACCTACGTCACCAGCGCTC
AATCCCATCAGCGGAAGGCATAAAGCTGGCAAAGGAGCAGGGAGCTATGTTTATTGAAAC
ATCGGCTAAAGACTCGACACACGTTAGAAAAGCATTTCACCGCTTGGTGGAGCAAGCGAG
CGACACTCTTGCGAAGAAGAAACAGCTTGAATATGGAGTGGAAAACGGCGGTGGGTTGCA
GCATGGTTCGGACGCTCTTAATGTCACAAGACCAAAAGAGGTTCCACAAGTAACTGTCGT
TCAGCAACAACCGAAAAAAGAAAACTATACTTTCCGCAGAGTAGCGCAAACGTGCTTGAC
AAATACTAAGGA

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[16-183] 1.26E-49
TIGRFAM
Small_GTP-bd_dom (IPR005225) - T[18-173] 6.8E-26
Pfam
Small_GTPase (IPR001806) - T[21-179] 3.5E-52

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RB11A_HUMAN 47.059 % 171 2.86E-53
RB11B_HUMAN 46.471 % 168 2.49E-52
RAB25_HUMAN 41.04 % 154 9.46E-47