- Transcript 'KH2012:KH.L57.5.v1.R...' >
- EST 'AHC0AAA224YO07_RM1' >
- Transcript 'Harore.CG.MTP2014.S8...' >
- Transcript 'Phmamm.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S451.g08897.01.t
Possible name(s)
EML1; EML5; EML6
Gene model
Location
S451 [85,905 / 89,938]
Amino acid sequence
Length: 472
>Phmamm.CG.MTP2014.S451.g08897.01.p
MLLSVGLDDQHSVAVWRWQEGAKACSHPTSRQRVFCAEFRPDSDAAFVTVGVKHVMFWQV
CGSAILGKRGVLGATEGIQAQTMLSIAFGAEDLTFTGAMNGDVYVWKKHILSRTVAKAHA
GPVFSMFTTLRDGLIVTGGKEKLTKEGGAVKLWDQDMRRCRAFQVPTSVVKSVSRGKGKI
LVGTRDSEVMEIGEKNGACTTLVYGHTEGELWGLACHPTTMMCITTSDDKTARIWDVNEK
VMLHKISLTAGSRACAFSHDGTRVVIGQNNGEILLLDVVSLKVLSKKRDRSGAVYDIRFS
PDDKIVAVGSSEQTLDFYELNLENAMNRVGYCKQIPSFVFQMDFSKDGKYIQAGTGSYTQ
LVFEVPSGSPVVDTKVINKISWDSWTSVLGDDVIGIWPKNCERGDVNCAHVSHGANAVAT
GDDFGLVKLFDFPCREKFTKPRKFVGHSAHVTNARFVRDDSRLITTGGDDCW
Nucleotide sequence
Length: 1,419
>Phmamm.CG.MTP2014.S451.g08897.01.t
ATGCTGTTGTCTGTAGGCTTAGACGACCAACACTCGGTGGCGGTATGGAGGTGGCAAGAA
GGCGCAAAGGCTTGTAGTCACCCAACCAGCAGACAACGAGTGTTTTGCGCTGAATTTCGA
CCAGATTCGGATGCTGCTTTTGTTACAGTTGGCGTTAAACACGTGATGTTTTGGCAGGTT
TGTGGATCGGCTATTCTTGGTAAACGAGGAGTTCTCGGTGCTACGGAAGGAATCCAAGCA
CAGACTATGCTTTCAATTGCGTTCGGAGCGGAGGATCTTACATTTACTGGAGCGATGAAC
GGTGACGTGTATGTTTGGAAGAAGCACATTTTGTCACGAACTGTCGCAAAAGCTCATGCT
GGACCCGTCTTCTCCATGTTCACCACACTCAGGGATGGACTGATTGTCACCGGTGGTAAA
GAAAAACTCACCAAAGAAGGAGGAGCAGTGAAGCTGTGGGATCAGGACATGAGAAGATGT
CGGGCCTTCCAAGTTCCTACAAGTGTCGTCAAATCTGTTTCACGCGGAAAGGGCAAAATC
TTAGTTGGCACAAGAGATTCAGAAGTGATGGAGATTGGTGAGAAGAATGGAGCTTGTACC
ACTTTGGTGTATGGACACACTGAGGGCGAGTTATGGGGATTGGCGTGTCATCCAACCACT
ATGATGTGCATCACTACATCTGACGACAAGACGGCAAGGATATGGGACGTCAACGAAAAG
GTCATGCTTCACAAGATATCGCTGACCGCTGGATCACGTGCCTGTGCGTTTAGTCACGAT
GGTACGCGCGTTGTGATTGGTCAGAATAACGGCGAGATTCTCCTGCTCGATGTTGTATCA
CTCAAAGTTCTTTCTAAAAAGCGTGATCGAAGCGGAGCTGTGTATGATATCAGATTCAGC
CCCGACGACAAAATCGTGGCAGTGGGCTCATCCGAACAAACTTTAGATTTCTATGAGCTA
AACCTGGAAAACGCGATGAACCGTGTCGGATATTGTAAGCAGATTCCAAGTTTCGTGTTT
CAGATGGATTTCTCCAAAGACGGAAAATATATTCAGGCTGGAACGGGATCCTACACACAG
CTTGTATTTGAAGTTCCTTCTGGAAGTCCGGTGGTGGATACCAAAGTCATTAACAAGATA
AGCTGGGATTCGTGGACTAGTGTTTTGGGTGATGACGTTATCGGTATTTGGCCAAAGAAC
TGTGAGCGCGGTGACGTCAACTGCGCTCACGTCAGCCACGGAGCGAACGCAGTTGCTACG
GGCGACGACTTCGGACTAGTGAAACTTTTCGACTTTCCATGTCGCGAAAAATTTACAAAA
CCCAGGAAGTTTGTTGGACACTCGGCTCACGTGACCAACGCTCGGTTTGTTCGTGATGAC
AGTCGCCTCATAACTACCGGTGGCGACGATTGTTGGTAG
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1-162] 1.3E-8 - T[182-472] 6.1E-67 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[2-236] 3.84E-16 - T[176-470] 2.2E-36 |
| SMART |
WD40_repeat (IPR001680) - T[20-59] 210.0 - T[108-154] 22.0 - T[196-236] 6.1E-4 - T[239-277] 47.0 - T[280-319] 0.53 - T[390-431] 57.0 - T[437-470] 150.0 |
| Pfam |
WD40_repeat (IPR001680) - T[199-236] 0.011 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[204-328] 10.522 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[223-237] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EMAL5_HUMAN | 57.684 % | 595 | 0 |
| EMAL6_HUMAN | 61.895 % | 622 | 0 |
| EMAL1_HUMAN | 31.942 % | 236 | 1.93E-69 |