- Clone 'cien221799' >
- Clone 'cicl077e23' >
- Clone 'cien87190' >
- Transcript 'Cisavi.CG.ENS81.R19....' >
- Transcript 'Phmamm.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S453.g08914.01.t
Possible name(s)
POU4F1; POU4F2; POU4F3
Gene model
Location
S453 [50,395 / 52,404]
Amino acid sequence
Length: 280
>Phmamm.CG.MTP2014.S453.g08914.01.p
MPPPVYSSMHPPSAFHHTAALQSTLETNDVIDQLGSSHGAFPTYQHPTFNTSSVMMSSAD
PVSQPHYISHTAPPYNPTSHFHPVSSSIHPSIPPPSSTTATTTQPASPNTIVANFPASEY
DADPRELEAFAERFKQRRIKLGVTQNDVGRALANLKLPGVGSLSQSTICRFESLTLSHNN
MVALKPILIAWLEKAEEEHRRKMESAGLGDKKRKRTSIAAPEKRSLEAYFAVQPRPSSEK
IAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSAFNAEAML
Nucleotide sequence
Length: 1,155
>Phmamm.CG.MTP2014.S453.g08914.01.t
CCCCCCATCGCTTTTTAATCGGGGTCAAATCCCATTGTAAACACCAAAGTCGCACGGGTA
GCGAATCGGAAACATATGCTTCGGATGATGGGATTTATTAAACTTACAAAACATTGACTT
TTTCAGGGCAACTTATTCGCTGGTTTCGACGAATCTTTTCTCGCGCGAGCGGAGGCTCTG
GCCGCTGTGGATTACACCGGAAAGAACCAGTTTAAACCGGAACCGACAAACCACTCATAT
TATGCCCCATCAGCTACACATTATGTTACGCAGCAGCATACAGCCCCAGCTATGCCACCG
CCAGTGTACAGTTCAATGCATCCGCCGTCAGCTTTTCACCACACAGCCGCTCTACAATCC
ACCCTCGAAACAAATGACGTCATCGATCAGCTGGGCTCCTCTCACGGGGCATTTCCCACA
TACCAGCATCCCACCTTTAACACGTCATCAGTAATGATGTCATCCGCCGACCCAGTGTCA
CAACCGCACTACATCAGCCACACTGCGCCCCCATACAACCCCACCAGCCACTTTCACCCA
GTGTCATCATCGATTCACCCCTCCATACCCCCACCATCCAGTACGACGGCAACAACAACA
CAGCCAGCGTCTCCTAACACAATCGTGGCAAACTTCCCCGCCAGTGAGTACGACGCAGAC
CCACGAGAATTGGAAGCATTTGCTGAAAGATTCAAGCAACGACGTATTAAGCTTGGAGTT
ACACAAAACGACGTGGGCAGAGCACTTGCCAACCTTAAGTTACCTGGAGTTGGCTCCTTA
AGTCAAAGCACAATTTGCAGGTTTGAATCGCTCACCCTTAGTCACAACAACATGGTGGCT
CTTAAGCCAATCCTTATCGCCTGGTTGGAAAAGGCTGAAGAGGAACATAGAAGAAAGATG
GAAAGTGCAGGACTAGGAGACAAAAAGAGGAAAAGAACTTCAATTGCTGCTCCAGAAAAA
CGGTCCCTCGAAGCCTACTTTGCAGTTCAGCCACGGCCTTCATCCGAGAAAATAGCAGCC
ATTGCTGAAAAGCTTGACCTCAAGAAAAACGTTGTGAGAGTTTGGTTTTGCAATCAAAGG
CAAAAACAAAAAAGAATGAAATTTTCAGCTTTTAATGCGGAAGCAATGCTTTAATTTGTC
GATCACCATCTCTGC
| SMART |
POU_dom (IPR000327) - T[119-196] 1.8E-48 |
| ProSiteProfiles |
POU_dom (IPR000327) - T[119-196] 46.581 |
| SUPERFAMILY |
Lambda_DNA-bd_dom_sf (IPR010982) - T[120-196] 6.1E-21 |
| Pfam |
POU_dom (IPR000327) - T[124-196] 4.3E-29 |
| CDD |
Cro/C1-type_HTH (IPR001387) - T[131-173] 0.0021866 |
| ProSitePatterns |
POU_dom (IPR000327) - T[137-149] . - T[164-177] . |
| PRINTS |
POU (IPR013847) - T[138-155] 2.4E-34 - T[164-177] 2.4E-34 - T[180-195] 2.4E-34 - T[210-230] 2.4E-34 - T[245-260] 2.4E-34 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[207-269] 5.13E-16 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[209-269] 16.811 |
| SMART |
Homeobox_dom (IPR001356) - T[211-273] 1.4E-17 |
| CDD |
Homeobox_dom (IPR001356) - T[212-270] 1.28965E-15 |
| Pfam |
Homeobox_dom (IPR001356) - T[212-268] 3.4E-17 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[244-267] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PO4F2_HUMAN | 84.906 % | 279 | 1.24E-92 |
| PO4F3_HUMAN | 81.366 % | 270 | 8.15E-90 |
| PO4F1_HUMAN | 86.709 % | 278 | 6.98E-92 |