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  1. Transcript 'Phmamm.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S456.g08950.01.t

Possible name(s)

VIRMA

Location

S456 [88,678 / 96,321]

Sequences

Amino acid sequence

Length: 1,922

>Phmamm.CG.MTP2014.S456.g08950.01.p
MKLLFCDTFSQEPADGSVFSSWAAINFPVPVVLEEIRILSRGYCLHDQLANEGQIGSTSP
AQFRIDFFASDSNNDSCSAFENLCTLEYKESSQTSVLPPLPFVTDKLLCSGWYQRVTIAV
FGAEASDSVAVKAIRERREYGSRNRALLPTPKEPPRHTDVPRLPDKVDDNLQKFTKVHSS
SVTPPINPQTDPQPHEFEHNKSGEGAAFKGNFSNRPPEIRPYTDRQPIDLQYQKNRGDFY
NKRPPALLPTPGSNEVRDSQRGNKYQYERLDRSLRRSSQNDVGDWHHEQRRTSRQEHDGR
NAEVANDETMEQDRSLLHQYDTEQRTDEEWMDDAEYEEISDDDIMDEDAAANMEAILAED
MLLPSSMMNFNPFDMMAYPLTYYKPPEVTESEILRHKVLDQIESGEDTASDQAVKEMQKG
ISELQQLIDLAKSMCLSLEEDQNMGQTCGIEIVPGKEAEWVSCIEKMLPKLKGSLSCLDL
SNTVDIDYVAILVSYSIYCLRLNSPLAKILGVNVRALKSGLSLALELLHTSVETAEQLVQ
HGLLDAVFSLLETSHIASSVKISAIHVLDAVTNWPLMMHYFMYGHGDNNIDFKTDYARAV
EMALVSQAARVAAALAQLVQKAHIYECMVYIKTATHAIVSSKIPAEYAYVSEEENDEADE
IFSAHDEADMGVVPSVAGYEVVEDSSIPEDETPSKQSTGLGDHDNLRIIQQSGHRRVFGE
ASGSEDNADSGLKNSFESVLVENTTPLESVFSLEDVNVTNEVISKLAKSLDEISVAFRNP
SASIGQLHIKAFPVKSSQPLKQDPNLCDVTLFRMSEFTGLLPSIQALMTLPFVSGFKSLF
DSCCGFLEQLMSNAKQLLHVCSNSDSLIHVVHHLLKSSQNLDVEIPGTPGNFALKLAIHI
QCIQSLDHISSLLEQDITDEEDEELVHALRVLYSVTYLPLGKQCLARILAMDDFVTSMVP
CLLYPAKVSDVADCKPESVERTSTKDSEDQKSESDSKTVESSDKNDEKKPEIIYHRSAVN
HYAASIVLNTLIKSESVAYVLKHKSIFKKTCLARTHSIPKSDALANWLHPLKSTVESEQY
DLGKLLVYLKTESEQMEWKTFPDIGPKVCMGLRMLCHACNTDKTQQGSANLRLRMKDMFS
ADGLNILLTVIEKLHTCLVHVCHGLRAMSIGLPVTLFNTLISVARSSVKLVALMHDQLFT
AGIDGKCVNGDRFIKAVVPLYSDLYILARPVDTILLDDITQIFVSAVSQFFEHKSCFDQS
DGILCELLKHAESQCDNFVPTLTLLSQLLPLPLPIVSPEKPDGDSASSVLKLSSMWSTCI
MPHIDRLMSLLLPLSASKCRPLLDVTVALTQQVMDLSPALAHEVVRKYIEEIAPLLVNTT
VTLEDGSEANDEQIAGEKELMLSPEQITTIAVFAEIATLPAAKSAAISALYNEGDGILDL
WQYASSDLCPDDAVAATLLLATVLVDSDIALLPSFDDDLKSLSTYVPSTLHLRQITSLAI
QQLISQSDLVVARALLVILRVVDQRQALAFIRNGLSKSDTHLLKCIENINEKFDPKNSQS
VDVAINLIALLSDMIEPESIDMPEADCCRPCLTITQLSTLLQWNDNPQHPLRVFESKVNQ
LCSFDDESCDGALDKLAVLRQSLVVVENGAGEITIVQEPDLPAPPPLADQFAGRPVFVLG
TDDTILESRLAITCPEFCPASEEPKTSEFVRCDLVSTAVEFCPGYDLAEQLSKLAKSSDF
LCEALDSDSSRSRRQPKVETYSSNHGKTLTYMKRSHGLLSQPRPGRGRRGARGIPRAPRG
SFSNSNLNQGKFRPPVRGRSQERYRGTGTTRLSSRLSYSPREGFKTNKTENPSWGVSNRN
FTQAGGSQYRGRGTKFAKYPRAPPSPFGSSRGGGKQWQNSPFPRRGRGYGKPRGKHIRSF
TR

Nucleotide sequence

Length: 5,769

>Phmamm.CG.MTP2014.S456.g08950.01.t
ATGAAGCTGTTATTTTGTGATACGTTTTCGCAAGAGCCAGCTGATGGAAGTGTATTCAGC
AGTTGGGCAGCCATTAACTTCCCTGTCCCAGTAGTCCTTGAGGAAATTAGAATTTTATCA
AGAGGATACTGTTTGCATGACCAACTTGCTAATGAGGGTCAAATTGGAAGTACAAGCCCG
GCACAGTTTCGAATAGATTTCTTTGCCAGTGATTCCAACAATGATTCCTGCAGCGCATTT
GAGAACCTGTGTACTTTGGAGTATAAAGAGTCATCTCAAACGAGTGTACTTCCACCTTTA
CCGTTTGTGACAGACAAACTTTTGTGCAGTGGATGGTACCAGCGAGTGACTATTGCAGTT
TTCGGGGCTGAGGCCTCTGATAGTGTTGCTGTAAAAGCAATACGGGAGAGAAGAGAGTAT
GGCAGCAGAAACAGAGCACTATTACCAACACCAAAAGAACCACCCAGGCATACTGATGTC
CCCCGACTTCCAGACAAAGTTGATGACAACTTGCAGAAGTTTACAAAGGTGCACAGTAGT
TCAGTTACACCACCAATTAACCCCCAAACAGATCCTCAGCCTCATGAATTTGAACACAAT
AAATCTGGGGAAGGCGCTGCATTTAAAGGCAATTTTTCCAATCGACCTCCTGAAATTAGG
CCTTATACTGACCGACAGCCAATTGACTTGCAGTATCAAAAAAATAGAGGTGACTTTTAC
AACAAACGCCCTCCAGCACTTCTACCTACTCCTGGAAGTAATGAGGTTCGAGATTCCCAG
AGAGGAAATAAGTACCAATACGAAAGGTTGGATCGATCTTTACGCAGAAGTTCACAGAAT
GATGTCGGTGATTGGCATCATGAACAAAGAAGGACCTCCAGACAAGAACATGATGGTAGG
AATGCGGAAGTTGCTAATGATGAAACTATGGAGCAAGACAGAAGTTTGTTGCATCAATAT
GACACTGAACAGAGGACTGATGAGGAATGGATGGATGATGCAGAATATGAAGAAATTAGT
GATGATGATATTATGGATGAGGATGCAGCTGCTAATATGGAAGCAATTCTGGCGGAAGAC
ATGTTGCTACCAAGCAGTATGATGAACTTTAACCCATTTGATATGATGGCATATCCACTG
ACATATTACAAACCACCAGAGGTGACGGAAAGTGAAATTTTACGTCACAAGGTATTGGAC
CAAATTGAGTCAGGAGAAGACACTGCAAGTGATCAAGCTGTTAAGGAGATGCAAAAGGGA
ATTTCAGAACTACAGCAGCTTATCGATTTGGCAAAAAGTATGTGCTTAAGTCTGGAGGAA
GACCAAAATATGGGGCAAACCTGTGGCATAGAAATTGTACCTGGAAAAGAAGCTGAATGG
GTTTCATGTATAGAGAAGATGCTGCCAAAATTGAAAGGTTCTCTGTCATGTTTGGACCTG
AGCAACACTGTCGATATAGATTATGTTGCAATTTTAGTTTCCTACTCAATATATTGTCTG
AGATTGAATAGCCCTTTGGCAAAAATTCTCGGTGTAAATGTGAGAGCATTGAAGTCGGGA
CTCAGTTTGGCTCTCGAGCTTTTACATACCAGTGTCGAAACTGCTGAACAACTTGTACAG
CATGGTTTACTCGATGCGGTTTTCTCTTTACTTGAGACTTCACATATTGCATCTTCTGTG
AAAATAAGTGCTATCCATGTGCTTGATGCAGTAACTAATTGGCCATTGATGATGCATTAC
TTTATGTATGGTCATGGGGACAATAATATTGATTTTAAAACCGACTATGCCAGAGCGGTG
GAAATGGCATTGGTATCTCAAGCAGCAAGAGTGGCAGCTGCACTCGCTCAGCTGGTTCAG
AAGGCACATATCTACGAATGCATGGTCTACATAAAAACTGCAACTCATGCCATAGTCAGT
TCAAAAATACCTGCCGAGTATGCATATGTTTCTGAAGAGGAAAATGATGAAGCTGATGAG
ATTTTTTCCGCTCATGATGAAGCTGACATGGGGGTTGTTCCTTCTGTTGCAGGATATGAA
GTTGTTGAGGATTCATCAATACCAGAGGATGAAACTCCTAGCAAGCAATCTACGGGTCTT
GGAGATCATGACAATCTTCGTATTATTCAACAAAGTGGACACCGAAGAGTTTTTGGTGAA
GCTTCTGGTTCTGAAGATAATGCTGATTCAGGACTGAAGAACTCTTTTGAAAGTGTTCTT
GTGGAAAACACCACTCCTCTTGAAAGTGTGTTCAGTTTGGAAGATGTTAATGTAACAAAT
GAGGTAATAAGCAAACTTGCTAAAAGTTTGGATGAAATTTCGGTTGCTTTTCGCAATCCT
TCAGCTTCTATTGGTCAACTACACATTAAAGCTTTTCCAGTAAAGTCATCACAGCCCTTG
AAACAGGATCCAAACCTGTGTGATGTGACATTATTTAGGATGAGTGAATTTACTGGTCTT
CTGCCGTCCATACAAGCGCTAATGACATTACCATTTGTGTCTGGATTCAAATCTTTGTTT
GATTCATGTTGTGGCTTTTTGGAGCAACTGATGTCAAATGCAAAGCAGCTTTTACATGTT
TGTTCCAATTCTGACTCCCTGATTCATGTAGTTCACCATCTGCTAAAATCTTCACAAAAT
CTAGATGTTGAGATACCTGGTACACCTGGAAACTTTGCACTGAAGCTGGCTATTCACATC
CAGTGCATACAATCTCTTGATCACATCAGTAGCTTACTGGAGCAAGATATTACGGATGAA
GAGGATGAAGAACTTGTCCATGCCTTGAGAGTCCTATATTCTGTTACTTATCTGCCTTTG
GGAAAGCAGTGTTTGGCTAGGATCCTTGCAATGGATGATTTTGTGACATCAATGGTACCT
TGCTTGTTGTATCCTGCAAAGGTTTCAGATGTTGCTGATTGTAAACCTGAATCTGTGGAA
AGGACTTCCACAAAAGACTCTGAAGATCAGAAATCTGAAAGTGACTCCAAAACTGTAGAA
AGTTCAGACAAAAATGATGAGAAGAAACCTGAAATTATCTATCACAGAAGTGCAGTAAAT
CATTATGCAGCCTCAATTGTTCTAAATACACTGATCAAATCAGAATCAGTTGCATATGTC
TTAAAACATAAAAGCATCTTCAAAAAAACGTGCCTTGCCAGGACTCACTCCATTCCGAAA
TCAGATGCATTAGCAAACTGGTTACACCCACTGAAATCGACAGTAGAGAGTGAACAATAT
GATCTTGGAAAACTTCTGGTGTATTTGAAGACTGAATCTGAGCAAATGGAATGGAAAACC
TTTCCTGACATTGGACCAAAAGTTTGCATGGGACTCCGCATGCTGTGTCATGCATGCAAT
ACAGATAAAACCCAACAAGGCTCTGCTAACTTGAGACTTCGAATGAAGGACATGTTTTCT
GCTGATGGACTCAACATCCTACTTACAGTAATTGAAAAACTCCACACCTGCTTGGTTCAC
GTTTGCCATGGCCTTCGTGCCATGTCTATTGGTCTCCCCGTCACTCTTTTCAACACTCTT
ATTTCAGTGGCACGAAGTAGTGTAAAACTTGTGGCACTCATGCACGATCAACTCTTCACT
GCTGGCATTGATGGCAAATGCGTTAACGGGGATCGGTTTATCAAAGCTGTGGTGCCTTTG
TACTCGGATTTGTATATCCTCGCAAGGCCAGTAGACACCATACTGTTGGATGACATAACA
CAAATATTTGTATCTGCAGTGTCTCAGTTCTTCGAGCACAAATCCTGCTTCGATCAGTCC
GACGGGATTTTATGTGAACTTCTCAAGCACGCCGAGAGCCAATGTGACAACTTTGTCCCA
ACTTTAACTCTTTTATCACAACTGTTGCCGCTGCCTTTGCCAATAGTAAGTCCAGAAAAA
CCAGATGGCGATTCTGCGTCGTCTGTTCTTAAACTGTCAAGCATGTGGTCTACTTGCATT
ATGCCTCATATTGACCGTCTCATGTCGCTTCTCCTGCCCTTGTCAGCGTCCAAGTGTCGA
CCCCTTCTTGATGTTACCGTCGCCTTAACACAGCAAGTCATGGACTTATCGCCTGCGCTG
GCTCACGAAGTCGTGCGCAAGTACATCGAAGAGATCGCTCCTTTGCTGGTTAACACCACA
GTGACTCTAGAGGACGGCTCAGAAGCAAACGATGAGCAAATAGCAGGAGAGAAGGAACTG
ATGCTTTCACCAGAACAGATCACCACAATCGCGGTTTTTGCTGAAATTGCGACGCTTCCT
GCTGCAAAATCGGCCGCCATATCAGCACTGTACAACGAAGGCGACGGAATTCTCGACCTA
TGGCAGTATGCAAGTAGTGACCTATGTCCGGACGATGCTGTAGCGGCCACGCTTCTTTTG
GCGACTGTCCTCGTTGACTCAGATATCGCACTATTGCCTTCCTTCGATGATGACCTAAAA
TCGTTATCCACCTACGTTCCTTCGACGCTTCACTTGCGGCAGATAACAAGTTTGGCAATT
CAGCAGCTGATCAGCCAATCAGATCTTGTTGTGGCCCGAGCGTTGTTGGTCATTCTGCGA
GTTGTTGATCAGAGACAAGCGCTTGCATTCATACGAAACGGATTGTCAAAGAGCGACACC
CATCTGTTGAAATGCATCGAAAACATCAACGAGAAATTCGACCCGAAGAACTCGCAATCT
GTTGATGTCGCTATTAACCTAATTGCGCTGCTTTCGGACATGATTGAACCGGAGAGCATC
GATATGCCCGAAGCTGACTGCTGCAGACCGTGTTTGACAATAACCCAACTCTCCACCCTT
CTGCAATGGAATGACAACCCTCAACACCCACTTCGAGTATTTGAAAGTAAAGTTAACCAA
CTGTGTTCGTTTGATGACGAAAGCTGTGACGGGGCTTTGGACAAATTAGCTGTGTTGCGA
CAAAGTTTGGTTGTTGTTGAAAATGGTGCGGGTGAAATTACAATCGTACAGGAGCCCGAT
TTACCAGCACCTCCTCCTCTAGCTGACCAATTCGCCGGACGTCCTGTGTTTGTGCTTGGA
ACTGATGACACTATTTTAGAGAGTCGTCTTGCCATTACTTGTCCTGAGTTTTGTCCCGCT
AGCGAAGAACCGAAGACAAGTGAATTCGTAAGGTGTGATTTAGTGTCGACAGCAGTTGAA
TTCTGCCCTGGCTACGATCTAGCGGAACAACTGAGCAAACTTGCCAAGTCCAGTGATTTT
CTTTGTGAAGCTCTGGATTCGGATTCGTCCAGGTCTCGACGCCAACCTAAAGTTGAAACG
TACAGTTCAAATCATGGCAAAACCTTGACCTACATGAAACGGTCGCACGGATTACTGTCG
CAGCCACGACCTGGCAGGGGACGTCGTGGTGCGCGAGGAATCCCACGGGCGCCGAGGGGA
AGCTTTTCCAATAGCAACCTGAACCAGGGCAAATTTCGACCACCAGTGCGCGGCCGTTCC
CAGGAGCGATACAGGGGAACAGGAACAACTCGTCTCTCAAGTCGACTCAGCTATTCACCA
AGAGAAGGCTTTAAAACTAACAAAACCGAAAACCCGTCCTGGGGAGTTTCCAACCGCAAC
TTCACGCAAGCTGGAGGAAGCCAATACCGAGGCCGTGGCACAAAGTTCGCGAAATATCCA
AGAGCACCGCCATCGCCGTTTGGTTCGAGTCGAGGCGGAGGAAAGCAGTGGCAGAACTCG
CCCTTTCCACGCAGAGGTCGCGGATACGGGAAACCTCGAGGGAAACACATACGCTCGTTC
ACACGTTAA

InterProScan

Pfam
VIR_N (IPR031801) - T[1-273] 2.7E-20
PANTHER
Virilizer (IPR026736) - T[1-667] 1.9E-109 - T[754-1908] 1.9E-109

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VIR_HUMAN 21.194 % 84 7.42E-16