- Transcript 'Boleac.CG.SB_v3.S338...' >
- Molecular Tool 'En>Delta2' >
- Molecular Tool 'cieg40m20-MO' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Phmamm.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S45.g01721.02.t
Possible name(s)
ADGRB2; HMCN1; THBS1
Gene model
Location
S45 [164,801 / 171,655]
Amino acid sequence
Length: 483
>Phmamm.CG.MTP2014.S45.g01721.02.p
PGKAYRGKDMFESKVSWLTVGNTPLFFRMGPYKLVGYCNAEGRVRRCGKYRVKKNQCERF
RCCWNEVTESCYRAKFHVLNYPLEKGSWTTWSSWSGCAAATVCSAGTQVRTRQCTDGTAG
QGGCQGVESESKSCSICTNSWSTWGTWSVCSSSDVPCLVGSRTRSRTCANSLGAVQATTS
CLGGSTAAIQTASCNTGLCPLFTGWTVGACSVTCGGGTQTQSRTCTTTPTTTLPSQCYST
TLTCNTNLCNQDRNLDLMILLDSTATLDDCVTKQFALQFNAPVTVASGLLTSTNFPNFVQ
QNSMASTILSSWKSIFPGMTQVGILQQSDRCDIADPATLNSVHQFGLPYTAGTLLQTEYL
CGSDDRYSQLSCGVSSLNSIVNRADVPDVIIQFIPDVTQINPTYMSVYRQLVGFVATLVQ
GKRLLVVSAAQHTATTASANILFAQQWACGSLTPTGPCTNYYLGTIYDIPGVLANLRSVV
STL
Nucleotide sequence
Length: 1,545
>Phmamm.CG.MTP2014.S45.g01721.02.t
CTCCTGGAAAAGCTTATCGTGGCAAAGACATGTTTGAATCGAAAGTTTCGTGGCTGACAG
TGGGGAATACGCCGTTGTTTTTCCGCATGGGACCCTACAAATTGGTTGGTTACTGCAACG
CTGAGGGACGGGTCAGACGATGTGGAAAATACCGTGTTAAAAAAAACCAGTGCGAGAGAT
TTCGATGCTGTTGGAATGAAGTGACCGAATCATGTTACAGAGCAAAGTTTCACGTACTTA
ATTATCCACTGGAAAAGGGTAGCTGGACAACTTGGTCCTCCTGGTCTGGATGTGCTGCTG
CTACAGTTTGCTCTGCTGGAACACAAGTGCGAACACGTCAATGTACCGACGGAACAGCTG
GTCAGGGCGGGTGCCAAGGAGTTGAGTCAGAAAGCAAGTCTTGTTCGATATGCACCAATA
GCTGGTCGACCTGGGGTACTTGGTCGGTTTGCTCAAGTTCGGATGTGCCTTGCCTTGTTG
GATCACGCACCAGATCACGAACTTGCGCCAACTCTCTTGGAGCTGTTCAAGCCACCACAT
CCTGCCTCGGTGGAAGTACTGCTGCAATACAGACTGCATCCTGCAACACCGGTCTGTGCC
CCTTGTTTACCGGTTGGACAGTTGGAGCCTGCAGTGTGACTTGTGGTGGTGGAACCCAAA
CACAATCAAGAACATGCACCACAACCCCAACCACCACCCTGCCGAGTCAATGTTATTCTA
CAACTTTAACTTGTAACACAAACTTGTGCAACCAGGACAGAAATCTTGACTTGATGATTC
TTCTTGACTCAACTGCAACGTTGGATGATTGTGTCACCAAGCAATTTGCCCTTCAGTTTA
ACGCACCAGTCACGGTAGCCAGCGGCCTGCTGACAAGCACTAACTTCCCAAACTTTGTGC
AACAAAACTCTATGGCTTCAACAATTCTGTCGTCTTGGAAAAGCATTTTCCCTGGAATGA
CCCAAGTCGGTATTCTTCAGCAGTCTGACAGATGCGACATTGCTGATCCAGCCACTTTAA
ATAGTGTACACCAGTTCGGACTTCCCTACACCGCTGGAACGCTGCTGCAAACAGAATACC
TTTGTGGATCAGACGACAGATACAGTCAACTTTCTTGTGGTGTTTCTTCATTAAACTCAA
TCGTTAACCGGGCAGATGTACCTGATGTCATTATCCAGTTCATTCCCGATGTTACGCAAA
TCAACCCGACATATATGAGTGTTTATCGTCAACTGGTCGGCTTTGTTGCCACACTGGTTC
AAGGAAAACGACTTCTGGTGGTCAGCGCAGCCCAGCACACTGCCACAACTGCAAGTGCAA
ACATTCTATTTGCACAACAATGGGCTTGTGGGTCACTTACCCCAACAGGTCCATGCACCA
ATTACTACCTTGGAACAATCTACGATATTCCAGGAGTTTTAGCCAATCTGCGATCAGTAG
TTTCTACTTTGTAGAGGACTTTACATTTCAACGAAAAACCTAGAACGTTTTGACGTACTT
TGATAATTTTGAGCAACATCTAACACTTTTTCGTGAAGAATTAGC
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[84-137] 1.9E-6 - T[138-200] 2.6E-6 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[85-135] 9.548 - T[138-200] 10.306 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[86-134] 1.44E-5 - T[136-199] 7.19E-5 - T[208-249] 9.55E-5 |
| SMART |
TSP1_rpt (IPR000884) - T[88-138] 0.083 - T[141-200] 1.4E-5 - T[202-250] 0.066 |
| Pfam |
TSP1_rpt (IPR000884) - T[90-135] 0.057 - T[142-182] 0.003 - T[207-249] 0.0014 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 34.194 % | 86.7 | 1.04E-17 |