- Transcript 'Phmamm.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S461.g09001.02.t
Possible name(s)
SEC23A; SEC23B; SEC24B
Gene model
Location
S461 [107,346 / 119,117]
Amino acid sequence
Length: 711
>Phmamm.CG.MTP2014.S461.g09001.02.p
MTTYQEYILQNEERDGVRLSWNVWPSSRLEATRMVVPLSCLFTPLKERVDMPPIQYEPIL
CTRHTCRAVLNPLCQVDYRSKIWTCNFCYQRNPFPASYAAITETHQPAELIPQFTTLEYQ
LPAQPTIGPVFLFVLDTCMDEEDLQEMLGLNKVPGSNQPGQQQNNTANLPANRFLQPLHK
CDMFVTDLLGELQRDPWPVSQGKRPLRSVGTALSIAVGLLECAFPNVPARVMLFMGGPCT
QGPGMIIDDSLENTIRSWYDIEKDNNKYTKKAVKHYEALSTRAANNGHTIDIYACALDQT
GLHEMKCCTNLTGGLMVMGDSFNTSLFKQTFQKVFSKDSKGEFNMAFNATMEIKASREIK
VNGVIGPCVSLNVRSPSVSETEIGIGGTSQWKASGIDPSTTFAVFLEIVNQHNAPIPQGG
RGTVQFITQYTHSSGQRRVRVTTIARNWADPNTGQSHIAAGFDQEASAVLMSRLAIHRSQ
NDEGQDVLRWLDRMLIRLCQKFGDFQKDAPETFRFAENFSLYPQFMFHLRRSSFLQVFGH
SPDETAYYRYQFDRQDLTNSLIMIQPVLYSYSFNGPPEPVLLDSTSIQPDKILLLDTFFQ
VLIFHGETIDQWKKAGYHEKPEYENFRQLMQAPVFDAQDILATRFPIPRYIETQQGGSQA
RFLFHKVNPSQTYNNTMFGGQQDGSAAVLTDDVSLQVFMDHLKKLAVSSAS
Nucleotide sequence
Length: 2,136
>Phmamm.CG.MTP2014.S461.g09001.02.t
ATGACAACATACCAGGAGTACATACTTCAAAATGAAGAAAGAGATGGTGTCCGACTTAGT
TGGAATGTTTGGCCATCATCAAGACTTGAGGCAACACGAATGGTTGTTCCACTTTCATGT
CTATTTACTCCTTTGAAAGAAAGAGTGGATATGCCTCCTATTCAGTATGAACCCATACTG
TGTACCAGACACACCTGTCGTGCTGTTCTTAACCCCTTGTGTCAAGTTGATTATCGCAGC
AAAATCTGGACATGTAACTTCTGCTATCAGCGAAACCCTTTTCCAGCCAGTTATGCTGCG
ATAACAGAAACCCATCAGCCTGCTGAACTCATACCACAGTTTACTACACTTGAATATCAA
CTACCAGCACAACCAACCATTGGTCCTGTGTTCTTATTTGTGCTTGATACATGTATGGAT
GAAGAAGATTTACAGGAAATGTTGGGACTGAACAAAGTTCCTGGTAGCAATCAACCTGGT
CAGCAACAGAACAACACTGCGAATTTGCCTGCAAATCGATTCCTTCAGCCACTTCACAAG
TGTGACATGTTTGTTACTGATCTCCTTGGTGAACTGCAGCGGGACCCATGGCCAGTTAGC
CAGGGAAAACGTCCCCTGCGCTCAGTTGGCACAGCTTTGTCCATTGCTGTTGGCTTGCTT
GAGTGTGCTTTTCCAAATGTGCCAGCTCGTGTAATGCTGTTTATGGGTGGTCCATGTACC
CAAGGTCCTGGTATGATCATTGATGATAGTTTGGAAAACACAATTCGATCGTGGTATGAT
ATTGAAAAGGACAATAACAAGTACACCAAGAAAGCAGTGAAGCATTATGAGGCCCTGTCT
ACCCGTGCAGCAAACAATGGACACACGATTGATATTTATGCATGTGCTCTCGATCAAACT
GGTCTTCATGAAATGAAATGCTGCACAAATCTTACTGGGGGCTTAATGGTGATGGGCGAC
TCGTTCAACACTTCTCTCTTCAAGCAAACTTTCCAGAAAGTTTTCTCCAAAGATTCCAAG
GGGGAATTTAACATGGCATTTAACGCCACTATGGAAATCAAGGCATCACGCGAAATCAAA
GTGAATGGTGTGATCGGTCCTTGCGTGTCGCTGAACGTCCGCAGCCCGAGTGTGTCAGAA
ACGGAGATTGGCATTGGTGGAACTTCACAATGGAAAGCAAGCGGAATTGACCCATCGACA
ACTTTTGCAGTGTTTCTGGAAATCGTCAACCAGCACAACGCTCCAATCCCACAAGGCGGC
AGAGGAACGGTACAGTTTATTACACAATATACTCACTCAAGTGGTCAACGCAGGGTCAGA
GTCACCACCATAGCTCGCAACTGGGCCGACCCTAATACTGGACAATCTCATATCGCTGCT
GGGTTCGACCAAGAAGCTTCCGCAGTTCTCATGTCAAGACTCGCAATACATCGGTCGCAA
AATGACGAGGGACAGGATGTTTTGCGATGGCTCGATCGAATGCTGATAAGACTGTGCCAA
AAATTCGGGGACTTCCAGAAAGATGCGCCGGAGACCTTCCGATTCGCCGAGAACTTTTCA
CTTTACCCGCAGTTTATGTTTCATTTGCGCCGTTCAAGTTTTCTCCAAGTATTCGGTCAC
AGTCCTGATGAAACGGCTTACTACCGTTACCAGTTTGACAGACAAGATCTCACCAACTCG
CTGATTATGATCCAACCCGTCTTGTACAGCTACTCGTTTAACGGACCTCCCGAGCCGGTT
TTGCTGGACAGCACGAGCATCCAACCCGACAAGATTCTTCTTCTCGACACTTTCTTCCAA
GTTCTCATTTTTCATGGCGAGACAATCGATCAATGGAAAAAGGCAGGTTACCACGAGAAA
CCGGAATACGAAAACTTCCGGCAACTCATGCAGGCACCGGTGTTTGATGCACAGGATATT
CTTGCTACGAGGTTCCCTATTCCAAGATATATTGAAACGCAGCAAGGAGGAAGTCAGGCG
CGATTTCTTTTCCACAAGGTCAACCCGTCGCAAACTTATAACAACACGATGTTCGGTGGG
CAACAGGATGGCTCAGCTGCTGTTTTAACAGACGATGTCAGCTTACAAGTGTTTATGGAT
CATCTAAAGAAGTTGGCTGTGTCAAGTGCATCATAA
| PANTHER |
Sec23 (IPR037364) - T[1-145] 0.0 - T[143-709] 0.0 |
| SUPERFAMILY |
Znf_Sec23_Sec24_sf (IPR036174) - T[51-123] 2.88E-20 |
| Pfam |
Znf_Sec23_Sec24 (IPR006895) - T[58-98] 7.6E-15 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[129-337] 3.56E-59 |
| Pfam |
Sec23/24_trunk_dom (IPR006896) - T[141-335] 1.3E-50 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[146-334] 5.5E-39 |
| Pfam |
Sec23_24_beta_S (IPR012990) - T[346-449] 1.1E-32 |
| SUPERFAMILY |
Sec23/24_helical_dom_sf (IPR036175) - T[463-565] 2.49E-43 |
| Pfam |
Sec23/24_helical_dom (IPR006900) - T[463-561] 1.7E-24 |
| CDD |
Sec23_C (IPR037550) - T[555-675] 1.9309E-77 |
| Gene3D |
ADF-H/Gelsolin-like_dom_sf (IPR029006) - T[565-669] 5.5E-115 |
| SUPERFAMILY |
Gelsolin-like_dom_sf (IPR036180) - T[566-707] 2.88E-54 |
| Pfam |
Gelsolin-like_dom (IPR007123) - T[577-663] 6.7E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SC23A_HUMAN | 65.714 % | 1049 | 0 |
| SC23B_HUMAN | 63.199 % | 1014 | 0 |