- Transcript 'Phmamm.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S461.g09001.03.t
Possible name(s)
SEC23A; SEC23B; SEC24B
Gene model
Location
S461 [108,830 / 119,265]
Amino acid sequence
Length: 565
>Phmamm.CG.MTP2014.S461.g09001.03.p
MLGLNKVPGSNQPGQQQNNTANLPANRFLQPLHKCDMFVTDLLGELQRDPWPVSQGKRPL
RSVGTALSIAVGLLECAFPNVPARVMLFMGGPCTQGPGMIIDDSLENTIRSWYDIEKDNN
KYTKKAVKHYEALSTRAANNGHTIDIYACALDQTGLHEMKCCTNLTGGLMVMGDSFNTSL
FKQTFQKVFSKDSKGEFNMAFNATMEIKASREIKVNGVIGPCVSLNVRSPSVSETEIGIG
GTSQWKASGIDPSTTFAVFLEIVNQHNAPIPQGGRGTVQFITQYTHSSGQRRVRVTTIAR
NWADPNTGQSHIAAGFDQEASAVLMSRLAIHRSQNDEGQDVLRWLDRMLIRLCQKFGDFQ
KDAPETFRFAENFSLYPQFMFHLRRSSFLQVFGHSPDETAYYRYQFDRQDLTNSLIMIQP
VLYSYSFNGPPEPVLLDSTSIQPDKILLLDTFFQVLIFHGETIDQWKKAGYHEKPEYENF
RQLMQAPVFDAQDILATRFPIPRYIETQQGGSQARFLFHKVNPSQTYNNTMFGGQQDGSA
AVLTDDVSLQVFMDHLKKLAVSSAS
Nucleotide sequence
Length: 1,902
>Phmamm.CG.MTP2014.S461.g09001.03.t
CCCCAACCCTGTTTTTCACTGCACTGTTTAACTAATGCAATATTATTTTGCAGGAAATGT
TGGGACTGAACAAAGTTCCTGGTAGCAATCAACCTGGTCAGCAACAGAACAACACTGCGA
ATTTGCCTGCAAATCGATTCCTTCAGCCACTTCACAAGTGTGACATGTTTGTTACTGATC
TCCTTGGTGAACTGCAGCGGGACCCATGGCCAGTTAGCCAGGGAAAACGTCCCCTGCGCT
CAGTTGGCACAGCTTTGTCCATTGCTGTTGGCTTGCTTGAGTGTGCTTTTCCAAATGTGC
CAGCTCGTGTAATGCTGTTTATGGGTGGTCCATGTACCCAAGGTCCTGGTATGATCATTG
ATGATAGTTTGGAAAACACAATTCGATCGTGGTATGATATTGAAAAGGACAATAACAAGT
ACACCAAGAAAGCAGTGAAGCATTATGAGGCCCTGTCTACCCGTGCAGCAAACAATGGAC
ACACGATTGATATTTATGCATGTGCTCTCGATCAAACTGGTCTTCATGAAATGAAATGCT
GCACAAATCTTACTGGGGGCTTAATGGTGATGGGCGACTCGTTCAACACTTCTCTCTTCA
AGCAAACTTTCCAGAAAGTTTTCTCCAAAGATTCCAAGGGGGAATTTAACATGGCATTTA
ACGCCACTATGGAAATCAAGGCATCACGCGAAATCAAAGTGAATGGTGTGATCGGTCCTT
GCGTGTCGCTGAACGTCCGCAGCCCGAGTGTGTCAGAAACGGAGATTGGCATTGGTGGAA
CTTCACAATGGAAAGCAAGCGGAATTGACCCATCGACAACTTTTGCAGTGTTTCTGGAAA
TCGTCAACCAGCACAACGCTCCAATCCCACAAGGCGGCAGAGGAACGGTACAGTTTATTA
CACAATATACTCACTCAAGTGGTCAACGCAGGGTCAGAGTCACCACCATAGCTCGCAACT
GGGCCGACCCTAATACTGGACAATCTCATATCGCTGCTGGGTTCGACCAAGAAGCTTCCG
CAGTTCTCATGTCAAGACTCGCAATACATCGGTCGCAAAATGACGAGGGACAGGATGTTT
TGCGATGGCTCGATCGAATGCTGATAAGACTGTGCCAAAAATTCGGGGACTTCCAGAAAG
ATGCGCCGGAGACCTTCCGATTCGCCGAGAACTTTTCACTTTACCCGCAGTTTATGTTTC
ATTTGCGCCGTTCAAGTTTTCTCCAAGTATTCGGTCACAGTCCTGATGAAACGGCTTACT
ACCGTTACCAGTTTGACAGACAAGATCTCACCAACTCGCTGATTATGATCCAACCCGTCT
TGTACAGCTACTCGTTTAACGGACCTCCCGAGCCGGTTTTGCTGGACAGCACGAGCATCC
AACCCGACAAGATTCTTCTTCTCGACACTTTCTTCCAAGTTCTCATTTTTCATGGCGAGA
CAATCGATCAATGGAAAAAGGCAGGTTACCACGAGAAACCGGAATACGAAAACTTCCGGC
AACTCATGCAGGCACCGGTGTTTGATGCACAGGATATTCTTGCTACGAGGTTCCCTATTC
CAAGATATATTGAAACGCAGCAAGGAGGAAGTCAGGCGCGATTTCTTTTCCACAAGGTCA
ACCCGTCGCAAACTTATAACAACACGATGTTCGGTGGGCAACAGGATGGCTCAGCTGCTG
TTTTAACAGACGATGTCAGCTTACAAGTGTTTATGGATCATCTAAAGAAGTTGGCTGTGT
CAAGTGCATCATAAAAACGAAGCAATCTCTTAGGTCGTATGTAGAACAAGTGGAACAAAA
GGACGACAGTAGCCTTACGATTTCGTTGCAATACTTCTATTCCGTAGCCCTGCTTTACTT
TTTACCGATAACGAAGTTCGTGTTAAATAAATAATATTGAGT
| PANTHER |
Sec23 (IPR037364) - T[1-563] 5.4E-301 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[8-188] 4.2E-39 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[21-191] 3.56E-55 |
| Pfam |
Sec23/24_trunk_dom (IPR006896) - T[24-189] 1.9E-49 |
| Pfam |
Sec23_24_beta_S (IPR012990) - T[200-303] 7.5E-33 |
| SUPERFAMILY |
Sec23/24_helical_dom_sf (IPR036175) - T[317-419] 1.7E-43 |
| Pfam |
Sec23/24_helical_dom (IPR006900) - T[317-415] 1.2E-24 |
| CDD |
Sec23_C (IPR037550) - T[409-529] 2.8108E-79 |
| Gene3D |
ADF-H/Gelsolin-like_dom_sf (IPR029006) - T[419-523] 3.3E-115 |
| SUPERFAMILY |
Gelsolin-like_dom_sf (IPR036180) - T[420-561] 1.96E-54 |
| Pfam |
Gelsolin-like_dom (IPR007123) - T[431-517] 4.8E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SC23A_HUMAN | 71.479 % | 870 | 0 |
| SC23B_HUMAN | 68.959 % | 837 | 0 |