- Transcript 'KH2012:KH.C2.64.v1.A...' >
- EST 'BW407689' >
- Transcript 'KH2012:KH.C4.516.v3....' >
- Transcript 'KH2012:KH.L133.9.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S463.g09016.01.t
Possible name(s)
CRISPLD1; CRISPLD2; VIT
Gene model
Location
S463 [52,371 / 55,499]
Amino acid sequence
Length: 190
>Phmamm.CG.MTP2014.S463.g09016.01.p
MPAPTCRIIACYLFLASVMHFQRCASMQATCDTKLSDLKHSITKVICPGGCWMQHSDLCG
TDDYASGPLCLAAMHAGLMDGEGGYFEVFKSDPLPMYEGTTRFGVISRSCDSASNTYSFQ
MKCSTKGNSEFSITHVVCPSGCPSNYVCGTNPYNSDSSVCAAAINAGVLTDSGGAVTFYL
RESKGTHLKC
Nucleotide sequence
Length: 822
>Phmamm.CG.MTP2014.S463.g09016.01.t
CATTAACAACAAGGAGATGCAGGAGATGGAAGTGCACATTAGGGTCACCCACTTTGCCAG
TTTTACAATCAGCGGTACACCAAGTCAGCAACATTACATGCAAATTGTGGACAACATTTT
CTGCATGTACGTTTTTGAGAGCCAGCATTAGTGCAGTAGTTGTGTACCAAATCAGATCGT
TTTAACTTTCCAGCTCAAAACTGGTGTCGTTGAAACAGCTATGATAACTGCACCTGGAAC
TTGAATTGCATAATGCCTGCACCGACATGCCGAATTATTGCATGTTATCTTTTCCTGGCG
AGTGTGATGCATTTTCAGAGGTGTGCGTCAATGCAAGCCACATGCGACACAAAACTGTCG
GATTTAAAACACTCGATCACAAAAGTGATTTGTCCCGGCGGCTGTTGGATGCAACATTCA
GATTTATGTGGGACTGACGACTACGCCAGCGGTCCTCTGTGTCTTGCTGCGATGCACGCT
GGACTGATGGACGGCGAAGGAGGATATTTTGAGGTGTTTAAAAGCGACCCACTTCCCATG
TATGAAGGCACAACAAGATTTGGCGTAATCAGCAGATCATGTGATTCTGCCTCAAATACA
TATTCATTTCAAATGAAATGCAGCACAAAGGGAAACTCAGAATTTTCCATTACTCATGTG
GTTTGTCCTTCCGGTTGTCCTTCCAACTACGTTTGTGGAACAAACCCGTACAACAGCGAT
TCGTCTGTTTGTGCAGCTGCTATTAACGCAGGAGTTTTAACTGATAGCGGAGGTGCGGTG
ACTTTTTACTTGCGTGAAAGTAAAGGAACGCATTTGAAATGT
| PANTHER |
Cochlin (IPR030743) - T[10-124] 5.4E-19 - T[112-180] 5.4E-19 |
| Gene3D |
LCCL_sf (IPR036609) - T[24-120] 3.7E-16 - T[121-188] 3.6E-14 |
| ProSiteProfiles |
LCCL (IPR004043) - T[25-117] 17.476 - T[136-179] 12.864 |
| SMART |
LCCL (IPR004043) - T[27-108] 3.6E-6 - T[119-189] 0.002 |
| SUPERFAMILY |
LCCL_sf (IPR036609) - T[27-120] 1.23E-19 - T[119-185] 4.84E-13 |
| Pfam |
LCCL (IPR004043) - T[31-114] 3.3E-13 - T[122-182] 1.3E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|