- Transcript 'Haaura.CG.MTP2014.S1...' >
- Clone 'cima858494' >
- Transcript 'KH2012:KH.C3.74.v1.C...' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Phmamm.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S463.g09020.01.t
Possible name(s)
CD209; CLEC4M; VIT
Gene model
Location
S463 [79,595 / 82,076]
Amino acid sequence
Length: 246
>Phmamm.CG.MTP2014.S463.g09020.01.p
MQHSDLCGTDDYARGPLCLAAMHAGLIDLKCSTKGNPEFSVTDVDCPSGCRSTYVCGTNL
YNGNSSVCVAAIHSGALKENGGAITFYSHEGQTSYNGSTKNGVSSQSCDTFLRSFSFTML
VDHVIMTTERNWADAREYCQSIGGDLATWGMRNATVRNWIVTNLLQTRPAADYWVGLDDI
EHEGVWNYIDGFPVTENNTDFNTGEPNNIGGPGLYNADCGHLNQIYTYKMDDHDCQRNQS
AICERF
Nucleotide sequence
Length: 741
>Phmamm.CG.MTP2014.S463.g09020.01.t
ATGCAACATTCAGATTTATGTGGGACTGACGACTACGCCAGAGGTCCCCTGTGTCTTGCT
GCGATGCACGCTGGACTGATAGACCTGAAATGCAGCACAAAGGGAAACCCGGAATTTTCT
GTCACTGATGTCGATTGTCCTTCAGGTTGTCGTTCCACCTACGTGTGTGGGACAAACCTG
TACAACGGCAATTCGTCTGTTTGTGTGGCGGCTATTCACTCAGGGGCTTTAAAAGAAAAC
GGAGGCGCGATTACATTTTATTCTCATGAAGGCCAAACTTCGTACAACGGTTCAACCAAA
AACGGCGTTTCCAGTCAGTCATGCGACACTTTCCTAAGATCCTTTTCGTTTACCATGCTT
GTTGACCACGTGATTATGACCACGGAAAGAAATTGGGCAGATGCGAGGGAATATTGCCAG
TCAATTGGTGGAGATTTGGCGACCTGGGGAATGAGAAACGCAACTGTTCGCAACTGGATT
GTCACAAATTTACTCCAAACGCGACCTGCTGCAGACTACTGGGTTGGTTTGGACGACATT
GAACATGAAGGAGTTTGGAATTACATTGATGGTTTTCCGGTGACAGAAAACAATACTGAT
TTCAATACTGGAGAGCCAAACAATATTGGTGGTCCCGGTCTTTATAATGCCGACTGCGGT
CATTTGAATCAAATATATACTTACAAGATGGATGATCATGATTGTCAACGTAACCAGTCT
GCAATATGTGAACGATTCTAG
| SMART |
LCCL (IPR004043) - T[27-106] 3.7E-11 |
| Gene3D |
LCCL_sf (IPR036609) - T[27-116] 1.9E-22 |
| ProSiteProfiles |
LCCL (IPR004043) - T[34-115] 17.773 |
| SUPERFAMILY |
LCCL_sf (IPR036609) - T[41-118] 5.49E-20 |
| Pfam |
LCCL (IPR004043) - T[41-114] 6.7E-18 |
| SMART |
C-type_lectin-like (IPR001304) - T[108-244] 1.0E-9 |
| Gene3D |
C-type_lectin-like/link_sf (IPR016186) - T[117-246] 3.1E-23 |
| ProSiteProfiles |
C-type_lectin-like (IPR001304) - T[123-244] 14.26 |
| SUPERFAMILY |
CTDL_fold (IPR016187) - T[124-245] 1.15E-21 |
| Pfam |
C-type_lectin-like (IPR001304) - T[129-245] 5.0E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|