- EST 'AHC0AAA152YM06_RM1' >
- Molecular Tool 'Hr-FGF9/16/20 MO (Hashimoto 2011)' >
- Transcript 'KH2012:KH.S654.4.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S463.g09021.01.t
Possible name(s)
CELSR3; CRB1; NOTCH2
Gene model
Location
S463 [85,888 / 89,509]
Amino acid sequence
Length: 317
>Phmamm.CG.MTP2014.S463.g09021.01.p
MFLHEGEGGYFEVFQSDPLPKYEGTSRFGIISESCDSASNTYSFQMKCSTKGSSEFSITH
VVCPSGCRSNYVCGTNLYNSDSSVCAAAINAGVLTDSGDTVTFYLRENEETLSCGILRSS
FNFIEENTCLRSCQNKGQCLSGINAEFCSCLPGTTGKDCEIVPDFCAQNNEVCQNGGTCL
DNDVSYSCLCLGGYVGLHCETAPDFCASSPGLCRNSGTCADTSTGYSCSCTVCSIIENLV
HPGPDVGYWIGLTDIEQEGVWKYIDDIAMTTENTNFWEGEPNNLGSNEDCASLDRTSQMN
DIVCDGKHFAICERTLN
Nucleotide sequence
Length: 954
>Phmamm.CG.MTP2014.S463.g09021.01.t
ATGTTTCTGCACGAAGGCGAAGGAGGATATTTTGAAGTGTTTCAAAGCGATCCACTTCCC
AAGTATGAAGGCACATCGAGATTTGGTATAATCAGCGAATCATGTGATTCTGCCTCAAAT
ACATATTCATTTCAAATGAAATGCAGCACAAAGGGAAGCTCAGAATTTTCCATCACTCAT
GTGGTTTGTCCTTCCGGTTGTCGTTCCAACTACGTTTGTGGGACAAACCTGTACAACAGC
GATTCGTCTGTTTGTGCAGCTGCTATTAACGCAGGAGTTTTAACTGATAGCGGAGATACG
GTGACTTTTTACTTGCGTGAAAATGAAGAAACGCTGTCATGTGGGATTTTGCGCAGTTCA
TTTAACTTTATTGAGGAAAACACTTGTTTGCGAAGCTGTCAAAACAAAGGTCAATGTTTG
TCGGGAATCAATGCAGAATTCTGTTCCTGTCTACCAGGGACTACAGGAAAGGATTGTGAA
ATTGTGCCTGACTTCTGTGCACAAAATAACGAAGTTTGTCAAAACGGGGGAACATGCTTG
GATAACGATGTGAGCTACAGTTGCTTATGTCTTGGCGGTTATGTTGGTCTGCATTGCGAA
ACAGCACCAGATTTTTGCGCCTCCAGCCCTGGTCTTTGTCGGAACAGCGGGACATGTGCA
GATACCAGCACTGGATACAGCTGTTCTTGTACTGTCTGCTCAATTATCGAAAATTTGGTA
CATCCCGGTCCCGATGTCGGCTACTGGATCGGTTTAACCGACATTGAGCAGGAAGGAGTT
TGGAAGTATATTGATGACATTGCCATGACAACCGAAAACACCAATTTTTGGGAAGGCGAA
CCAAACAACTTGGGGTCCAATGAGGATTGCGCGTCTTTGGATAGAACCTCGCAGATGAAC
GACATTGTTTGTGATGGAAAACACTTCGCAATCTGTGAAAGAACCTTAAATTAA
| Gene3D |
LCCL_sf (IPR036609) - T[43-123] 1.1E-13 |
| SUPERFAMILY |
LCCL_sf (IPR036609) - T[44-109] 8.24E-12 |
| Pfam |
LCCL (IPR004043) - T[57-109] 5.8E-11 |
| ProSiteProfiles |
LCCL (IPR004043) - T[61-104] 11.426 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[125-160] 15.241 - T[162-200] 18.482 - T[202-234] 6.848 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[125-160] 0.05 - T[164-200] 6.8E-4 |
| SMART |
EGF-like_dom (IPR000742) - T[128-160] 1.8 - T[165-200] 3.9E-6 - T[205-234] 210.0 |
| Pfam |
EGF-like_CS (IPR013032) - T[133-153] 0.011 - T[213-230] 0.035 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[148-159] . - T[188-199] . - T[188-199] . |
| Pfam |
EGF-like_dom (IPR000742) - T[166-197] 7.8E-7 |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[179-190] . - T[219-230] . |
| ProSiteProfiles |
C-type_lectin-like (IPR001304) - T[219-313] 13.146 |
| Gene3D |
C-type_lectin-like/link_sf (IPR016186) - T[234-315] 3.0E-18 |
| SUPERFAMILY |
CTDL_fold (IPR016187) - T[239-316] 1.05E-16 |
| Pfam |
C-type_lectin-like (IPR001304) - T[241-314] 1.1E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|