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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S47.g01795.01.t

Possible name(s)

PJA2; RNF115; RNF126

Gene model

Phmamm.CG.MTP2014.S47.g01795

Location

S47 [244,805 / 251,031]

Sequences

Amino acid sequence

Length: 147

>Phmamm.CG.MTP2014.S47.g01795.01.p
MVSVPDCLERISAVLQLLGQLDNAGPPPASEQTINGLPTIHVDQPLVDSGKECSVCMEAF
KLKDEAKKLPCSHFFHIPCIEPWLKLHNTCPICRKLVEDPQCGQPSSSSSAAPSQSGTAG
ETSGNNPFNFHFFMGPDGNDEDHTYAE

Nucleotide sequence

Length: 1,551

>Phmamm.CG.MTP2014.S47.g01795.01.t
CCGGGAGCGAGGCGTCGGGTAGTCATTTTTAAACGGATCATACTGGACGAACAGTCAAAT
CAAGAACTTTAGTTTCAAAACCATGGTATCTGTACCGGATTGCCTTGAACGCATTTCTGC
TGTATTGCAGTTACTTGGTCAGTTGGACAACGCAGGACCACCTCCAGCAAGCGAACAAAC
GATCAACGGATTGCCAACAATTCATGTCGACCAACCTCTCGTCGATTCGGGCAAAGAATG
TTCAGTGTGCATGGAAGCATTTAAACTCAAAGACGAGGCAAAGAAGTTGCCCTGTTCCCA
TTTTTTCCACATTCCATGCATTGAGCCGTGGCTTAAATTGCACAATACCTGTCCGATTTG
TCGAAAACTAGTGGAGGATCCGCAGTGTGGACAACCTTCTTCATCATCATCCGCTGCTCC
CAGTCAGTCAGGAACTGCGGGAGAAACCTCAGGGAACAATCCATTCAACTTCCACTTCTT
CATGGGACCCGATGGCAACGACGAGGATCACACGTACGCCGAGTGATCGCGTCACCATGT
GGTGAAGTACGAGATGCCAAACAGCCATGCGATGGCGCCAGAGAGATTATCCGCGTGAAC
CAAACCGTGGTTGGGGCAGAGTGGGGTAGCGTTGCGAATTTTACTGTTTCTTTCTGTTCT
GCGGAGATGTGCCTGGTGGGAATGGAAAATCTAAGAAACACCATACCTCACGGCAGCCCT
ACTGTCGCTAAATTCCCGATTGGTGGGGAAAATAATATTACCCATTTAAAACGATATATC
TCTAAAAATGCTGACGGTTAGGGCTATTTGGGTTGGGGTAAGGTATTTTCATTCAAAATA
CAATAATCCTAACTTCAAAACCTAGTTCCTAATCTAAAATCTAAAATTTTAAAAACTTTT
CCTTATTCCGTCCCTCTTTGGCTGTTAAATTAACAGTTCAGCTCTTTGCGCAACCTATCG
AAATTTGTGTGCCGGGGGGGGGGGCAAAATCTAAAATTTTAAAAACTTTTCTTTATTCCG
TCCCTCTTTGGCTGTTAAATTAATAGTTCAGCTCTTTGCGCAACCTATCGAAATTTGTGT
GCCGTGAGGTATGGTGTTGGTAGCTCTACCTGTGGGGGTTCGGTTGTCGGCGACATTTAT
TTTCTTGTACTTTCCAACTCGAACAAATTCATATCATGTACGGTGCTTAAAAGTAGAAGA
AAATTACGCAGATTTCACTTTGCGACTATTGTTTGGCCACGTGCGCCTCTTTGGATTGAA
ATGAACCTATTTAGTTTTCCCCCATTTTAAGTTCTTGTGCCGTTTGTGTGCGTTTTAATT
GCCCCTAGTAAATTTGTAGTCTCTTTTGTAGTACAGGTATCAAATGACAGTAAGGAAATG
AATTATAACTTTATCGCAGTTTGTGCATTGACCTTTCTGTCGTGTTTATGTTTTTCGGTT
GACCGCAACAAGTTAGCAATCAGTTGTTACTTGCTTTGATCAAACGATAGCGTGATTTCC
TTTTTCTTGCTGTTGCTGATTTACACAGTGCACGCGTATACAACATTAAAG

InterProScan

Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[19-100] 1.6E-21
Pfam
Znf_RING (IPR001841) - T[51-94] 1.9E-13
ProSiteProfiles
Znf_RING (IPR001841) - T[53-94] 12.548
SMART
Znf_RING (IPR001841) - T[53-93] 3.8E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RN126_HUMAN 47.619 % 95.9 1.76E-24
RN115_HUMAN 50.485 % 115 4.34E-32