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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L9.10.v1.A...' > 
  2. Transcript 'KH2012:KH.L87.8.v1.A...' > 
  3. Transcript 'KH2012:KH.C1.1261.v1...' > 
  4. Transcript 'Phmamm.CG.MTP2014.S3...' > 
  5. Transcript 'Phmamm.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S4830.g18572.01.t

Possible name(s)

NLRP1; NLRP12; NOD1

Gene model

Phmamm.CG.MTP2014.S4830.g18572

Location

S4830 [303 / 6,051]

Sequences

Amino acid sequence

Length: 402

>Phmamm.CG.MTP2014.S4830.g18572.01.p
MACRDRDMFWSSKAGGSGEKTEDQQAPKLEELGGRVPETSFHPSGVGSSTRETDPLPAEH
NSPDMKHHKTETEDSDSEISIESVNANKFDNIVNTIAEKERHHLRSIVKEKCGENYTFER
KRVKPVDLVLVKYTGQKDTDLKKQEEKKVRMVDEGNELKGDITIKNMFERAKIEAGGFKN
HEKSIGVVGAVGVGKSTLTKVIVQKILDKKILLDASFLFYLTVGSIDLEREIDLFELLFS
LLIRKGDLTVNKAEKIQLINCILKDPNTVVIIDGLDEAKTENLHSYPHVLPFAKAKPMAI
LYNILNDKLLENAYKLVTSRITQFIDASPEYRPKFVLEILGLAPSEQQKLARCVCGEQFD
RVWKILQDNPSLLECCVVPVNMLMALNFLLGGGTPDFATRQS

Nucleotide sequence

Length: 1,209

>Phmamm.CG.MTP2014.S4830.g18572.01.t
ATGGCATGTAGAGATCGTGACATGTTTTGGTCATCAAAAGCAGGAGGTTCAGGTGAAAAA
ACAGAAGATCAACAAGCCCCAAAACTTGAAGAGTTGGGTGGTCGGGTTCCAGAGACATCT
TTTCACCCATCAGGAGTTGGAAGTTCAACTAGGGAAACAGATCCATTGCCTGCTGAGCAT
AATTCTCCAGACATGAAACATCACAAGACGGAAACTGAAGACTCAGATTCTGAAATTTCG
ATAGAGTCAGTTAATGCAAATAAATTCGACAACATAGTAAACACCATAGCTGAAAAAGAG
CGTCATCATTTGAGGTCAATAGTAAAAGAAAAATGTGGCGAAAACTATACATTTGAACGG
AAACGAGTGAAACCAGTTGATCTTGTGCTTGTAAAATATACTGGACAGAAAGACACAGAT
CTTAAAAAGCAAGAAGAAAAAAAAGTCAGAATGGTAGATGAAGGAAATGAACTGAAAGGT
GACATCACAATTAAAAACATGTTTGAAAGAGCAAAGATTGAAGCAGGAGGCTTTAAAAAC
CATGAAAAATCAATTGGTGTTGTTGGTGCAGTTGGAGTGGGGAAGAGCACATTGACAAAA
GTTATTGTGCAAAAAATTTTAGACAAAAAAATTCTTCTTGATGCATCGTTTCTATTTTAC
CTCACAGTGGGCTCCATTGACCTTGAGCGAGAGATAGATTTGTTTGAATTACTTTTCTCA
TTACTGATTAGAAAGGGAGATCTTACTGTAAATAAAGCAGAAAAAATACAGCTGATTAAT
TGTATCTTAAAGGATCCCAACACAGTAGTAATCATTGATGGCCTGGACGAAGCCAAAACT
GAAAACTTACATTCATATCCACATGTTTTACCATTTGCAAAAGCAAAACCAATGGCTATA
TTATATAACATTCTAAATGACAAACTGCTTGAAAATGCTTACAAGCTGGTAACATCAAGA
ATTACTCAATTTATTGATGCTTCTCCAGAATACAGACCAAAATTTGTTTTGGAAATTTTG
GGTTTAGCACCAAGTGAACAGCAAAAACTTGCTAGGTGTGTATGTGGTGAACAGTTTGAC
AGAGTTTGGAAAATTCTTCAAGACAACCCATCTTTGTTGGAATGCTGTGTAGTACCTGTC
AACATGCTTATGGCTCTTAACTTTCTGTTGGGAGGAGGAACGCCAGATTTTGCAACAAGA
CAAAGTTAG

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[180-374] 4.88E-11
ProSiteProfiles
NACHT_NTPase (IPR007111) - T[183-320] 13.179
Pfam
NACHT_NTPase (IPR007111) - T[187-354] 5.5E-15

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value