- Transcript 'KH2012:KH.C9.38.v10....' >
- Transcript 'KH2012:KH.C7.730.v1....' >
- Transcript 'NCBI:KH.XM_018811872...' >
- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'Phmamm.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S4899.g18600.01.t
Possible name(s)
GIN1; NYNRIN
Gene model
Location
S4899 [0 / 5,864]
Amino acid sequence
Length: 1,205
>Phmamm.CG.MTP2014.S4899.g18600.01.p
METTWILFTPPPSDKTLLTYPKHNARLSLICDSSSYAVGACLNQFENNEWKPLGFFSKPL
SGAEKRYSTFDRELLAIYKAIKHFKYILQAREFKVITDHKPLISAFRSVSENQSPRQIRH
FDFIAQFTDQIEYITGIHNVVADSLSRVEVNTITLPSNTFSLEELAIEQQNESFLSEVNE
QCISLKVVHRLVPDTEVTIIGDISTGSFRPIVPRKLRKKVFLALHGLAHPGFKGTKQLIS
ERFVWHGMKNDVQDPPPHGATGKGFKSFGEKRLSVDFNLSRSFSWKFLVCADSLSRVEVN
TITLPSNTFSLEELAIEQQNESFLSEVNEQCISLKVVHRLVPDTEVAIIGDISTGSFRPI
VPRKLRKKVFLALHSLAHPGFKGTKQLISERFVWHVMKNDVQDWCKSCIPCQKSKVTIHN
RAPLGRYLEPEGRFTDLSIDIVGPLPACNGYSYLLTVVCRWTRWFTAIPLKDITASTCAD
AFILNWISIFGCPLRISTDRGAQFTSSLWSDLCNMPPPPPEGRFTDLSIDIVGPLPACNG
YSYLLTVVCRWTRWFTAIPLNDITASTCADAFILNWISIFGCPLRISTDRGAQFTSSLWS
DLCNMLGAKLQQTTAYHPASNGYIERQHRTLKAALRAQEYPNDWYSNLGLILLSLRATVK
SDISCSPAELVLGNTLRLPGEFFEEPIPGISKVEYAQRLSKFISNMKFIPPRINPPIRSH
LDPELKKCSHVFVKVAANKGPLYSHYDGPFKVIERHNKYYVLAMWGRTNSVSIDRLKVCY
LPSEINVTTNSNDPLICPDIIEGRSEGSETAATPDIEVDRTTESSTTAPTPPSPIIKTRT
GRVVRRPLRXEEWKRTLSAPLIGRLLQKSDTLYSTNNQIKIEYKWPTSNVGSVNNAILTK
STIYYDPINKKLRSALGIMSSCNVHQGFCSVGTRTFVWSVPKNVDCAITYPIGTHEMIQH
HGDSVNQPRRLEIPDLGLSIHHTFECPKEVASCSSPHAFCAGGIIVVPKNCTINTKRNRL
DIMQRSQKDGVQGLILNEATDALITSITNMTNDIHYVECQIQSLLSTVYSLLSRQYPGEI
ISQVLGGHRAAITTSDLMTEITCEEINGTILHSLRHGDLFATRPLIEYIDSTGTRIVGQL
YRDGFVYQNVKFLETYQPGRVLSFRIEEEFVVFDNYTLTHVDSNVHEIVPTLSPIHFSHR
TTDYQ
Nucleotide sequence
Length: 5,519
>Phmamm.CG.MTP2014.S4899.g18600.01.t
CAATGACATGGATGCCATAAAGACGATGCAAACCATGTCATTACTGAACAATGCAAACCA
ACCTCAAGTAAGTCCGCAGGCTACTTCTACACCCTTACGGTCGGAATATAGATCATTTGA
ATCTCGTCCGAATCGTAACTATGCTGGAAAAACTAAATATGTTCCAGTATCTAAAAGCAG
ATTTCCTCCACCGAGAGATCAACCTGCGCCGCATCAGTTGTGCTACTTTCATGCTCTCTA
CGGAATGGAAGCCAGGAGGTGCAGACCGGACTGTATTTTGTGGTCAAAAAACGCCAACGG
TCCTGGTCCCAATCGGTAAAGTACCAGGACTTCCGTTCAACAAGAAAAAGAAAAACCTTT
ACCGTAAAAGACGAACAAAGCAACTTGCACTTTTTAGTGGACAGCGGTAGTGACGTAAGC
ATCATACCCGCATGGTTTGCAAAAGGGTTTTGTAACAAAAAATCTGTAAATTTGTACGGT
GCTACAGGAAAAGGTTTTAAATCGTTTGGTGAAAAACGTTTGTATGTCGATTTTAATCTT
TCCAGATCTTTCAGCTGGAAATTTTTGGTCTGTGCAGTTCGCCAACCCATTCTTGGTGCT
GACTTTCTGCATCACTACGATCTGTTGATTGATACCAGAAGAAGGATTCTTATTCCACGA
AGCTGCACTAATATCGGCAAATCAACACTCTCGACCAAGCGTAAAGAACCAGTAAAAAGA
ACCCAGGAATCGAATCATTACACTGAGGTATGTTCGGTTTCAAGCAATAAAAGTCGGTCT
TTACAATCAAAGTTACCGCCTCGCAGCCGGGAACCAACTGCTAAACCGATAACTGTGTTT
GAAAAGCTTTTGAACGAATTCTCCTCACTAACCGCTAATTTCTCTCCAAACAAACCAACT
CGTCATGAAGTAACTCATGTGATTGAAACCCGCGGTCCACCTGTTTCTTGTCATCCCAGA
AGACTCTCGCCGGAAATGATGACCTCTGCCAAACGCTCGTTCGACGAACTGCTTGCCAAA
GGTATTGTTGAACATTCTAACAGTTGTTGGTCGTCTCCGTTACATATGGTTCGGAAAAAA
GATAATTCTTGGCGGGTAGTGGGCGATTATCGTCAGTTAAACCTCAACACTGTAAAAGAC
AAATATTCTATGCCGTATTTGCAAGATTTTGGAAACAATTTGCATGGTTGTACAATTTTT
AGTACCATCGATTTGTTATCTGCCTATCATCAGATACCCATGCACCCTGATTCGATTGCA
AAGACCACTATTGCCACACCTTTTGGTAATTTTGCTTATAAGCGCATGAGTTTTGGTCTT
TGCAATGCTGGTCAGACATTCCAACGTTTCATAAACCAAGTTGTACGCGGTTTGGACAAG
TTTTGTTTTGCTTATATGGACGATCTGTTGATTGCTAGCAAAAGTCAGGAGGAACATATA
GAACATCTGCGACAGGTATTCCAGCGACTACAATCATACGGTTTGTTGATAAACAAAGGC
AAAAGTGTATTTGGCAAATCTGAAGTAACGTTTCTAGGCCATTGCTTAACGCCTTCAGGC
TTTAAACCTATCGAGGCAAGGGTCAGGGCGATTAGAGAATATCCACGCCCCACTAACGTA
AATGAACTTAGACGTTTTCTAGGAATGTACAATTTCTATCGGAAGTTTGTTCCGCATGCC
GCTGAAAGTTTACAACATCTCAATGGAATGCTTTCTGGAAACAAGACGAAGAAACAGAAG
TTAGAATGGGAACCACATCTGATAGCTGCGTTTGAAGATGCAAAGACAAAGTTAAGTGAC
AAAACGTTACTAACCTATCCAAAACATAACGCTCGGCTTTCACTTATTTGTGATAGCAGC
AGCTATGCTGTCGGCGCATGTCTTAATCAGTTTGAGGACAACGAATGGAAACCACTTGGA
TTCTTTTCACCCCCCCCCCAAGTGACAAAACGTTACTAACCTATCCAAAACATAACGCTC
GGCTTTCCCTTATCTGTGATAGCAGCAGTTATGCTGTCGGTGCATGTCTTAATCAGTTTG
AGAACAACGAATGGAAACCACTTGGATTCTTTTCGAAACCACTTTCAGGGGCAGAAAAGC
GATATTCGACGTTTGACAGAGAGTTGCTCGCAATTTACAAAGCCATTAAACACTTTAAAT
ATATTTTGCAGGCACGCGAATTCAAAGTGATAACTGATCACAAACCTCTGATCAGTGCTT
TTCGATCTGTGTCTGAAAATCAGTCTCCTCGACAGATTCGACATTTCGATTTTATAGCTC
AGTTTACAGATCAGATAGAATACATCACTGGAATTCACAATGTTGTTGCAGATTCGCTGT
CTAGAGTTGAAGTGAACACCATTACACTTCCCTCCAATACTTTTTCTTTAGAGGAACTAG
CCATTGAACAACAGAATGAGTCATTTTTATCTGAAGTTAACGAACAATGTATTTCTTTGA
AGGTTGTGCACAGACTTGTTCCCGACACTGAAGTTACAATAATCGGTGACATTTCAACGG
GATCGTTTAGGCCAATCGTACCAAGAAAACTACGGAAAAAGGTTTTCTTGGCCCTTCATG
GCCTGGCTCATCCCGGATTCAAAGGAACCAAACAACTTATAAGCGAACGATTTGTTTGGC
ATGGAATGAAGAATGACGTCCAGGATCCCCCCCCCCACGGTGCTACAGGAAAAGGTTTTA
AATCGTTTGGTGAAAAACGTTTGTCTGTCGATTTTAATCTTTCCAGATCTTTCAGCTGGA
AATTTTTGGTCTGTGCAGATTCACTGTCTAGAGTTGAAGTGAACACCATTACACTCCCCT
CCAATACTTTTTCTTTAGAGGAACTAGCCATTGAACAACAGAACGAGTCATTTTTATCTG
AAGTTAACGAACAATGTATTTCTTTAAAGGTTGTGCACAGACTTGTTCCTGACACCGAAG
TTGCGATAATCGGTGACATTTCTACGGGATCGTTTAGGCCAATCGTACCAAGGAAACTAC
GGAAAAAGGTTTTCTTGGCCCTTCATAGCCTGGCTCATCCCGGATTCAAAGGAACCAAAC
AACTGATCAGCGAACGATTTGTTTGGCATGTGATGAAGAATGACGTCCAGGACTGGTGCA
AATCATGTATTCCTTGTCAGAAAAGTAAGGTGACAATTCACAATCGAGCTCCTCTTGGAA
GGTATTTAGAACCTGAAGGTAGATTCACTGATTTGTCAATAGATATTGTTGGACCATTGC
CCGCATGTAACGGTTATTCCTATCTTCTAACTGTTGTTTGTCGATGGACTAGATGGTTCA
CAGCAATCCCTCTGAAGGATATCACCGCCAGTACTTGTGCCGACGCATTTATTCTGAATT
GGATATCTATATTTGGTTGTCCCCTCAGGATTTCCACCGACAGAGGCGCCCAGTTCACCT
CTTCGTTATGGTCAGATCTTTGCAACATGCCCCCCCCCCCACCTGAAGGTAGATTCACTG
ATTTGTCAATAGATATTGTTGGACCATTACCCGCATGTAACGGTTATTCCTATCTTCTAA
CTGTTGTTTGCCGATGGACTAGATGGTTCACAGCAATCCCTTTGAACGATATCACCGCCA
GTACTTGTGCCGATGCATTTATTCTGAATTGGATATCTATATTTGGTTGTCCCCTCAGAA
TTTCCACCGACAGAGGCGCCCAGTTCACCTCTTCGTTATGGTCGGATCTTTGTAACATGT
TAGGAGCAAAACTTCAACAAACTACAGCTTACCATCCCGCAAGCAATGGGTACATCGAAC
GCCAACATCGCACTTTGAAGGCAGCCCTGCGAGCTCAAGAATATCCGAATGACTGGTATT
CAAATTTAGGATTGATCCTACTGAGTTTAAGAGCAACAGTAAAATCTGACATCAGTTGCA
GTCCTGCTGAACTTGTTTTAGGAAATACTTTGCGTTTACCAGGAGAGTTCTTTGAAGAAC
CTATTCCGGGAATATCAAAGGTTGAGTATGCACAACGGCTATCGAAATTCATTTCTAATA
TGAAATTTATACCACCTAGAATTAACCCTCCTATCAGATCTCATTTAGATCCGGAACTGA
AGAAGTGTTCCCACGTGTTCGTCAAAGTGGCTGCCAACAAAGGTCCTTTGTATAGCCATT
ATGATGGGCCGTTCAAAGTTATTGAACGGCACAATAAGTATTACGTTTTAGCCATGTGGG
GACGTACGAATTCTGTTTCTATTGATAGACTAAAAGTCTGTTATTTACCCTCAGAAATAA
ATGTAACTACTAATTCTAATGATCCTTTAATTTGTCCAGATATTATTGAAGGCAGATCTG
AAGGAAGCGAAACAGCCGCGACGCCCGATATCGAGGTTGATCGAACAACAGAATCATCAA
CCACTGCACCTACACCTCCTTCACCAATCATCAAAACCCGAACCGGTCGAGTTGTCAGAC
GACCACTCAGATNTGAAGAATGGAAACGTACTTTATCTGCACCACTTATCGGCAGATTGT
TGCAAAAAAGCGATACATTGTATTCTACTAACAATCAAATAAAAATAGAATACAAATGGC
CAACTAGCAACGTGGGGTCAGTCAACAACGCTATACTGACCAAGTCGACTATTTATTATG
ATCCCATCAACAAAAAGCTTCGTAGCGCTTTGGGGATTATGTCAAGCTGCAACGTCCATC
AAGGTTTTTGCAGTGTAGGAACTCGTACTTTCGTTTGGTCAGTTCCTAAAAACGTCGACT
GTGCCATTACATATCCCATAGGCACCCACGAGATGATCCAGCATCACGGCGATTCCGTGA
ATCAACCTCGACGCCTCGAAATACCCGATCTTGGCCTCAGCATTCACCACACTTTTGAAT
GTCCCAAGGAGGTTGCATCTTGCTCCTCCCCGCACGCTTTTTGTGCCGGAGGAATTATCG
TTGTACCTAAAAACTGTACTATCAACACAAAGAGGAATCGGCTGGACATTATGCAACGTT
CGCAGAAAGACGGAGTTCAAGGTCTAATCCTGAACGAAGCTACCGATGCTTTGATAACCA
GCATCACAAACATGACGAACGACATACACTATGTAGAGTGCCAAATTCAGTCTCTACTAT
CAACGGTCTACTCACTGCTGTCCCGTCAATATCCTGGCGAAATCATTAGCCAAGTACTTG
GAGGACATCGAGCAGCAATCACAACATCCGACCTAATGACCGAAATCACCTGCGAAGAAA
TCAATGGAACAATTCTTCATAGCCTTCGCCATGGTGACCTTTTCGCTACAAGGCCACTAA
TCGAATACATCGACTCAACCGGAACAAGAATAGTCGGTCAACTATACCGCGATGGTTTTG
TTTATCAAAACGTCAAATTTCTTGAAACTTATCAACCGGGACGAGTACTGTCATTCCGAA
TTGAAGAAGAATTCGTTGTATTCGACAACTACACATTGACGCACGTGGACTCGAACGTCC
ACGAAATCGTCCCAACTCTATCGCCAATCCACTTCAGCCATCGGACAACGGACTATCAA
| Gene3D |
RNaseH_sf (IPR036397) - T[423-516] 5.2E-23 - T[527-658] 1.1E-63 |
| SUPERFAMILY |
RNaseH-like_sf (IPR012337) - T[425-514] 1.23E-19 - T[518-670] 1.39E-34 |
| ProSiteProfiles |
Integrase_cat-core (IPR001584) - T[426-514] 10.607 - T[515-687] 19.802 |
| Pfam |
Integrase_cat-core (IPR001584) - T[439-514] 9.3E-9 - T[529-633] 1.1E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|