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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R77....'
  2. Transcript 'KH2012:KH.L22.74.v1....'
  3. Transcript 'Phmamm.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S4966.g18629.01.t

Possible name(s)

NLRP3; NOD1; NOD2

Location

S4966 [840 / 2,590]

Sequences

Amino acid sequence

Length: 218

>Phmamm.CG.MTP2014.S4966.g18629.01.p
MERIGMTSVGAVKLGEHLEMETTQSLVELNITRNEVGDIGACAITKSIHNLERLIMRDCG
ITCKGMPGITQNILNSQTKIPCLDLSWNKLGDDGAQELGKCLHLIKKLYLDDYDITSTGV
DALAGGLSKLQTAMHSLNLSYNKFGDDGTKKLSKCLHQVKRLHLLGCGITSTGVTALTEG
LSTLQTPMEELCLDESLVRNMSADDLQLFTSKVEKFEI

Nucleotide sequence

Length: 657

>Phmamm.CG.MTP2014.S4966.g18629.01.t
ATGGAACGAATTGGCATGACATCAGTTGGTGCTGTTAAGTTGGGTGAACATCTTGAGATG
GAAACTACACAGTCCTTGGTTGAATTGAACATTACTAGAAATGAAGTAGGTGACATTGGA
GCTTGTGCAATTACCAAGTCAATCCACAATTTGGAAAGACTTATAATGCGTGATTGTGGA
ATCACATGTAAAGGAATGCCAGGCATCACTCAAAACATCCTAAACTCTCAAACTAAGATT
CCCTGCTTGGATTTGTCATGGAACAAGCTTGGTGATGATGGGGCCCAGGAACTTGGAAAA
TGTTTGCATCTCATAAAGAAGCTTTACTTGGATGATTATGACATCACTTCCACCGGTGTA
GATGCATTGGCTGGTGGATTATCAAAGTTGCAGACAGCTATGCACAGCTTAAACTTGTCA
TACAACAAGTTTGGTGATGATGGGACAAAAAAGCTTTCCAAATGTTTGCATCAAGTGAAG
AGACTTCATTTGCTTGGATGTGGAATCACATCCACTGGAGTAACAGCATTGACTGAGGGA
TTGTCAACTCTACAAACACCAATGGAAGAGCTTTGTCTTGATGAAAGTCTTGTTCGTAAC
ATGAGTGCAGATGATTTGCAATTATTCACGTCAAAAGTAGAAAAATTTGAAATTTAA

InterProScan

Gene3D
LRR_dom_sf (IPR032675) - T[3-217] 1.2E-34
Pfam
Leu-rich_rpt (IPR001611) - T[24-41] 0.11 - T[82-98] 6.5E-4 - T[135-153] 0.0081

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value