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- Transcript 'Phmamm.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S4.g00170.01.t
Possible name(s)
FOXC1; FOXL1; FOXL2
Gene model
Location
S4 [94,034 / 95,921]
Amino acid sequence
Length: 513
>Phmamm.CG.MTP2014.S4.g00170.01.p
MEYEHRPPIPGPTDPYRQAYSKLPYDERSAYGSEYFGHIGQHYHAIAENHSVPVHNSLPS
TLNQSRNRSPSYNHQFQMIESHSYESYPHVESRNYNPSTGSSASEIGEHHGTYQCQPAVT
ARQSNSRLSADSCESPHIATSNHNNNIEINSCRTVSVDNSPTSGYQQPVGHLGTMSQRQD
GNDNPYIIRNGYHSSPPNQANHTHQFVGIGTVNGKEYENVQTNEPTLTEDRQSAFSHPCK
EQSKPLALDVKPKRPLGPNEASSKVNGKVPIAKKSKDPKTGKTAPTFKSVKLNESTDSCP
KGKLVSEVNKQTVNANSNNNSSIVSKPCNNTTIKIADKEDKNRTQKPPYSYVALIAMAIR
DSQDKKLTLSGIYQYIVEKFPFYEKNRKGWQNSIRHNLSLNECFIKVPREGGGEPVGSYT
SCQSPGTLEAHRAHHQGYYTATPGMISTGYGSAINGAQSAHQIGLNSRHSAGLGYHYSSH
GGYDSSGVAQCAVPCSTAGGHMGFHGAAMHPTY
Nucleotide sequence
Length: 1,542
>Phmamm.CG.MTP2014.S4.g00170.01.t
ATGGAATATGAACATCGACCTCCGATTCCAGGCCCAACAGATCCCTATCGACAAGCCTAT
AGTAAACTGCCTTACGATGAACGCAGTGCTTATGGTTCTGAGTATTTCGGCCATATTGGA
CAACACTACCACGCTATTGCAGAAAATCATAGCGTACCTGTTCACAACAGTCTTCCTTCA
ACCCTCAACCAAAGCCGAAACCGATCACCAAGCTACAACCATCAGTTTCAAATGATTGAA
AGTCACAGCTATGAAAGTTATCCACATGTTGAAAGCAGAAATTACAACCCATCAACAGGC
AGCTCTGCCTCAGAAATAGGTGAACACCATGGAACTTATCAGTGCCAACCTGCAGTGACT
GCGCGCCAATCCAACTCGCGCCTATCAGCTGATTCCTGCGAATCGCCACATATTGCCACA
AGCAACCACAACAACAACATAGAAATCAACAGTTGTCGCACAGTTTCGGTTGATAATTCA
CCAACTTCGGGGTATCAACAACCGGTTGGTCATTTAGGCACAATGTCACAGCGACAAGAT
GGTAATGATAATCCTTATATTATACGTAATGGCTACCATTCATCACCACCAAACCAAGCA
AACCATACACATCAATTTGTCGGCATTGGTACTGTCAATGGAAAAGAATACGAAAATGTA
CAGACAAATGAACCAACGTTAACAGAAGACAGACAAAGTGCATTTAGTCATCCTTGTAAA
GAACAAAGTAAGCCTTTGGCACTGGACGTTAAACCCAAACGCCCATTGGGACCGAATGAA
GCCAGTAGCAAGGTAAATGGAAAAGTACCCATAGCCAAAAAATCTAAAGATCCAAAAACT
GGAAAAACTGCTCCAACATTCAAGTCGGTTAAGCTCAATGAATCTACAGATTCATGTCCT
AAAGGAAAACTTGTGTCTGAGGTAAACAAACAGACTGTAAACGCAAACAGTAATAATAAC
AGTAGCATAGTTTCAAAGCCGTGCAATAATACCACAATAAAGATTGCGGACAAGGAAGAC
AAAAATCGTACCCAGAAACCTCCTTACAGCTATGTTGCATTGATCGCGATGGCCATTCGG
GATTCGCAAGACAAAAAGCTTACCTTGTCTGGAATTTATCAGTATATCGTTGAGAAGTTT
CCGTTTTACGAGAAGAATCGGAAGGGCTGGCAAAACAGCATTAGGCACAATCTCAGTCTA
AACGAGTGTTTCATTAAGGTTCCACGCGAGGGAGGCGGAGAGCCTGTTGGAAGTTACACA
TCCTGCCAGAGTCCTGGCACTTTGGAAGCGCACAGGGCTCACCATCAAGGCTACTATACT
GCAACCCCGGGAATGATCAGCACCGGTTACGGCAGCGCGATTAACGGAGCTCAGTCTGCA
CATCAGATCGGGCTAAATTCAAGACATTCGGCCGGACTTGGGTATCACTATTCCTCGCAT
GGGGGTTATGATTCGTCTGGAGTCGCGCAATGCGCTGTGCCTTGTTCCACAGCCGGGGGG
CACATGGGATTTCACGGGGCTGCCATGCACCCGACGTATTAA
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[332-434] 8.8E-35 |
| SMART |
Fork_head_dom (IPR001766) - T[344-450] 3.4E-42 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[345-419] 1.9E-30 |
| Pfam |
Fork_head_dom (IPR001766) - T[345-412] 2.6E-32 |
| CDD |
Fork_head_dom (IPR001766) - T[346-419] 4.01972E-42 |
| ProSitePatterns |
TF_fork_head_CS_1 (IPR018122) - T[346-359] . |
| PRINTS |
Fork_head_dom (IPR001766) - T[346-359] 1.6E-22 - T[367-384] 1.6E-22 - T[390-407] 1.6E-22 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[346-426] 30.276 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[390-396] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXC1_HUMAN | 64.935 % | 119 | 8.93E-29 |
| FOXL1_HUMAN | 66.667 % | 124 | 1.92E-31 |
| FOXL2_HUMAN | 79.518 % | 145 | 4.49E-39 |