Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Harore.CG.MTP2014.S5...' > 
  2. Transcript 'Moocci.CG.ELv1_2.S34...' > 
  3. Transcript 'KH2012:KH.L108.56.v1...' > 
  4. Transcript 'Boschl.CG.Botznik201...' > 
  5. Transcript 'Phmamm.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S4.g00171.01.t

Possible name(s)

HAND2; TWIST1; TWIST2

Gene model

Phmamm.CG.MTP2014.S4.g00171

Location

S4 [99,745 / 101,083]

Sequences

Amino acid sequence

Length: 371

>Phmamm.CG.MTP2014.S4.g00171.01.p
TPTVLNAVENPPMTCEGNTQNWMDNAVGYSNTHASDPQQSQAVYKDLPYGICAGNNSSEP
IVCKPPTTGNAGLATSTSLSAGYATFNDFRSLYSYSDTEAYIQEKPVSGNMGLPGHYQPE
GYSNGSYGPGTEDCEGFSMLEHFAMSANQFPASGSNCQSRIRTNLRKRERNLNINKAFED
LRGKIPNLPADTKVSKIKVLRLAADYIRHLNQVLEEANDTQDSCNALAEVNDSMSSLSPQ
QDGESESRKRSADEFKVDPDIVTIKRRKIDWTRIQEEITRHTNSSKSKCQEKQRHPYPQH
PAVYDNFTYPCSSTYLPQISSQPAPYMAQSQGFIFHPTPGCSNELNPPEVATHMANETSF
SPASFSSWETD

Nucleotide sequence

Length: 1,132

>Phmamm.CG.MTP2014.S4.g00171.01.t
GACACCTACGGTATTAAACGCAGTAGAAAATCCGCCTATGACTTGCGAAGGCAACACTCA
AAACTGGATGGATAATGCCGTTGGTTACTCCAACACGCATGCATCAGACCCACAACAAAG
TCAAGCAGTTTATAAAGACCTCCCATACGGCATATGCGCTGGTAACAATTCTTCTGAACC
TATCGTATGCAAGCCTCCGACAACGGGCAACGCAGGATTGGCAACTTCCACGTCTTTAAG
CGCAGGCTACGCTACTTTTAACGACTTCAGGAGCCTCTACTCTTACAGCGACACTGAAGC
CTATATCCAAGAGAAACCTGTATCTGGGAATATGGGCTTGCCCGGTCATTACCAACCTGA
GGGATATAGCAATGGTTCATATGGGCCAGGCACTGAAGATTGTGAAGGTTTTTCAATGCT
TGAACACTTTGCGATGTCTGCAAACCAGTTTCCAGCCTCCGGTTCTAATTGTCAAAGCCG
AATCAGGACCAATTTGCGCAAGCGCGAACGCAATTTGAACATCAACAAAGCGTTTGAAGA
TCTCAGAGGAAAGATTCCAAATCTTCCAGCGGACACAAAAGTATCGAAGATTAAAGTCCT
TCGCCTGGCAGCTGACTATATCAGACATTTAAATCAAGTACTGGAAGAGGCAAACGACAC
GCAGGATTCATGCAATGCCTTAGCTGAAGTCAATGACAGTATGTCCTCGCTTAGCCCACA
ACAAGACGGCGAAAGTGAGTCAAGAAAGCGTTCTGCAGACGAATTTAAGGTTGATCCCGA
TATCGTTACAATTAAGCGCAGAAAAATAGACTGGACCCGTATTCAAGAGGAAATTACACG
CCATACCAATTCATCAAAATCGAAATGCCAAGAAAAACAAAGACACCCCTATCCACAACA
CCCTGCTGTATATGATAATTTCACATACCCCTGCTCGTCCACTTATCTTCCACAAATTTC
ATCGCAACCAGCACCTTACATGGCCCAGTCTCAGGGCTTTATTTTCCACCCAACACCAGG
TTGCAGTAATGAGTTAAATCCGCCAGAGGTCGCTACGCACATGGCCAATGAAACTTCGTT
TTCACCAGCGTCGTTTTCAAGTTGGGAAACTGATTAGGCAGTGTTTTTCTTG

InterProScan

Gene3D
HLH_DNA-bd_sf (IPR036638) - T[156-222] 3.4E-19
SUPERFAMILY
HLH_DNA-bd_sf (IPR036638) - T[156-223] 6.15E-15
ProSiteProfiles
bHLH_dom (IPR011598) - T[158-210] 14.608
CDD
bHLH_dom (IPR011598) - T[158-215] 4.14864E-14
Pfam
bHLH_dom (IPR011598) - T[160-210] 8.7E-12
SMART
bHLH_dom (IPR011598) - T[164-216] 1.4E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value