Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 556

>Phmamm.CG.MTP2014.S4.g00173.01.p
MTINRLQSVAVLLILAVLCTERSAACNSTPSPVDCVVSGWGSWGDCSKTCELGSQVRKRY
ATTNQAHGGRNCPSLTESRSCRKAECPIDCQWGEWGGWTNCSSYGTKSRFRNITTPAMFG
GWECTGINVEVAAGCLPPEIKDVKCEQDQLLCRDEITCVRDTLTCNGDDDCTDYSDELHC
DAIYSPCSSPKDRIPSVDVVGAAFDILRNDETGTILDNWRYDGRCSIVTSGDHGRDFRKP
ANILSYRFQAKAESSFSMKSYECARTFMQEEREEQQYRMEVGFSFIFLSAKVAYSNDHKR
TSIIENGSKTNSKFFKTQSRIEVAQFRTLRHDLFTTYSFRQRESELPEHFDYAEYSKIIT
DFGTHYYSSGVLGGEFETIYRFDRSELEESRLSEDQQKQCIETEIGASTSSGAGGGVETS
ICSTNTLSQRYGGSFVAAAKEVVSTVRGGSSDTAASLTFSHQETPSKEDFDAWAETIKDN
PAVVDYMLAPISAVFTSDVKKANMEQALYEYMIRFNPDVCPPECLNEGEPVVVNDGKECK
CLCSINYSGPACRDAN

Nucleotide sequence

Length: 1,671

>Phmamm.CG.MTP2014.S4.g00173.01.t
ATGACAATAAACCGATTACAGTCTGTAGCAGTTTTGCTGATACTGGCTGTATTGTGCACT
GAACGCTCGGCAGCGTGTAATAGCACCCCTTCTCCAGTTGATTGTGTCGTTTCCGGCTGG
GGTAGCTGGGGAGATTGTTCAAAAACGTGTGAATTAGGTTCTCAGGTCCGCAAACGTTAC
GCAACAACCAATCAAGCACATGGTGGAAGAAATTGCCCTTCGCTTACCGAAAGTCGCAGT
TGCAGGAAAGCGGAATGCCCCATTGATTGCCAGTGGGGAGAGTGGGGTGGATGGACCAAT
TGTTCGTCATACGGCACGAAGAGCCGCTTCAGAAACATAACGACTCCGGCCATGTTCGGT
GGCTGGGAATGTACTGGCATAAACGTAGAAGTCGCAGCTGGGTGTCTTCCACCCGAAATC
AAAGACGTCAAATGTGAACAAGATCAACTTTTATGCCGAGACGAAATAACTTGCGTTCGG
GATACTCTTACTTGTAATGGAGACGATGACTGCACTGATTATTCGGATGAATTACACTGT
GATGCAATATATAGTCCATGTTCTTCACCCAAAGATAGAATTCCGAGTGTTGATGTTGTT
GGGGCCGCGTTTGACATCTTGCGGAATGATGAAACGGGAACTATTCTAGACAACTGGAGG
TATGACGGGAGATGCTCGATTGTGACAAGTGGTGACCACGGTCGGGATTTCAGAAAACCA
GCAAATATTCTTTCGTATCGCTTTCAGGCAAAAGCGGAAAGTTCTTTCTCCATGAAATCA
TACGAATGCGCCAGAACGTTTATGCAAGAAGAAAGAGAAGAACAACAATACCGGATGGAA
GTTGGATTTTCATTTATCTTTCTGAGCGCAAAAGTGGCTTACAGCAACGATCACAAAAGA
ACAAGCATTATTGAGAATGGCAGCAAAACTAACTCAAAATTCTTTAAAACGCAAAGCAGA
ATCGAAGTTGCGCAATTCAGAACTCTTCGACATGATCTCTTCACAACCTATTCATTTCGA
CAACGCGAGTCTGAACTCCCAGAACATTTCGACTACGCCGAATATTCAAAGATCATCACT
GACTTCGGCACTCATTACTATTCAAGCGGAGTGCTGGGCGGCGAATTTGAAACCATATAT
CGCTTCGACAGATCGGAATTGGAAGAATCACGTCTCTCAGAAGATCAACAAAAACAGTGT
ATAGAGACTGAGATAGGAGCTTCAACATCTAGTGGCGCAGGAGGCGGTGTTGAAACAAGT
ATATGTTCGACCAACACCCTATCCCAGCGTTACGGAGGAAGTTTTGTGGCTGCTGCAAAA
GAGGTTGTTTCCACTGTACGAGGTGGTTCTTCAGACACGGCTGCGTCTCTTACGTTTTCG
CACCAAGAAACGCCATCTAAGGAAGATTTTGATGCATGGGCTGAAACCATCAAAGATAAC
CCAGCAGTTGTCGACTATATGCTGGCTCCAATCTCGGCGGTGTTTACGTCAGACGTAAAG
AAAGCTAATATGGAACAGGCACTTTACGAGTACATGATTCGATTCAATCCTGATGTTTGT
CCTCCTGAGTGTTTGAATGAAGGAGAGCCAGTTGTGGTCAACGACGGCAAAGAGTGCAAA
TGTCTCTGTTCGATTAACTATAGTGGCCCAGCTTGCAGAGATGCAAATTGA

InterProScan

Gene3D	TSP1_rpt_sf (IPR036383) - T[33-81] 1.8E-13 - T[88-135] 1.5E-6
SUPERFAMILY	TSP1_rpt_sf (IPR036383) - T[33-81] 2.22E-10 - T[88-131] 3.01E-7
ProSiteProfiles	TSP1_rpt (IPR000884) - T[34-87] 11.087 - T[89-139] 8.949
SMART	TSP1_rpt (IPR000884) - T[37-87] 2.4E-10 - T[92-159] 0.023
Pfam	TSP1_rpt (IPR000884) - T[38-86] 1.6E-8 - T[93-130] 0.13
PRINTS	MAC_perforin (IPR001862) - T[108-124] 6.5E-21 - T[151-171] 6.5E-21 - T[344-366] 6.5E-21 - T[472-491] 6.5E-21 - T[521-541] 6.5E-21
Pfam	LDrepeatLR_classA_rpt (IPR002172) - T[144-180] 4.5E-7
SMART	LDrepeatLR_classA_rpt (IPR002172) - T[144-182] 1.1E-5
ProSiteProfiles	LDrepeatLR_classA_rpt (IPR002172) - T[144-181] 11.2
SUPERFAMILY	LDL_receptor-like_sf (IPR036055) - T[144-188] 4.97E-7
CDD	LDrepeatLR_classA_rpt (IPR002172) - T[145-180] 2.24382E-6
ProSitePatterns	LDLR_class-A_CS (IPR023415) - T[158-180] .
ProSiteProfiles	MACPF (IPR020864) - T[183-526] 29.458
Pfam	MACPF (IPR020864) - T[298-511] 2.2E-34
SMART	MACPF (IPR020864) - T[313-513] 1.9E-27
ProSitePatterns	MACPF_CS (IPR020863) - T[355-366] .
ProSiteProfiles	EGF-like_dom (IPR000742) - T[516-553] 8.541
ProSitePatterns	EGF-like_CS (IPR013032) - T[541-552] .