- Transcript 'Phmamm.CG.MTP2014.S5...' >
- Transcript 'Phmamm.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S502.g09503.01.t
Possible name(s)
ZEB1; ZEB2; ZNF232
Gene model
Location
S502 [84,312 / 90,499]
Amino acid sequence
Length: 828
>Phmamm.CG.MTP2014.S502.g09503.01.p
MFHPGRLLFLSVIEVCRARRFAELNIENNKINYDYINNGRNLFKSRLNNSHPLIDTSGIE
SALRIQPALTQTSCRGRMKTSSANENNSNSGTESGERQERPRLDESILQQMNSSSSEAAN
KNYIMHNYLNSVQHAFAAANLEKETNEQMPWLNALRSPDRQLDGRFSGSRNNDSLLPAAN
QALAAAQYRAWSQLQSSEKQQDRWNNSNSNNSVSVPPYSLLLQQQVMQAALASATAGRLP
MFSQNLLQQALALSAAQSSHQNSVEQGRSQNTQRFSSKPEKVRLPSDQQDQDEPLDLSAK
PKLLNKPNYQQQHEKDLSTDSGVVERQMSPTSLLSTAASSNLQQMLRNSALPPTGLSGLL
ANGLQLPNNTNSGLGSSELAYAQHLQNLIAGGMYNRENGIGVGVSPFPSPPNRSASSQSN
LTKRGRPKKRSLNEASGFSPAGQMNPTKHLLYDAITNRRTSPFAERELNAFRKSMQQTGS
PGSNMDNTSRLTEMPYKCDICDKCFQKQSSLTRHKYEHTGKRPHHCNECGKSFKHKHHLI
EHQRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYAYCKPGDALMQELRQQMKKSVDANT
QNNNTAENKPKKRKNFRSSASPQSPFYGDTNSAKMSPPGIGSALSPSRAHLPSFLSGYFS
KNPSSLSPKDHSAESPASFYEKMMEQAQRHMERQASAALSPNSGVNDHMQETSAKRSKME
SIKSDSDEFPRIKQEVNQLESSIERQGSLSPAQQEKEISDDKKPTFRNQSEENELSSLSP
SPSTSLSSPAQSPGLMTSPQGNQSPLDGHVTLKGSASFLHIPVATDLS
Nucleotide sequence
Length: 2,487
>Phmamm.CG.MTP2014.S502.g09503.01.t
ATGTTTCATCCGGGCCGCCTGCTCTTCTTAAGCGTGATTGAGGTGTGTCGTGCTCGCAGA
TTTGCTGAGTTGAATATTGAAAACAACAAAATTAATTACGACTACATAAACAACGGTCGC
AATTTGTTCAAATCAAGACTGAATAATTCGCATCCATTGATCGATACATCAGGGATCGAG
TCAGCTTTGCGAATTCAGCCGGCTTTGACCCAGACAAGTTGCCGCGGAAGAATGAAAACA
AGCTCGGCTAATGAGAACAACTCTAATAGTGGAACCGAAAGTGGAGAACGACAAGAACGA
CCTCGTCTTGACGAATCAATCCTTCAACAAATGAATAGCAGCTCTTCGGAAGCAGCAAAC
AAGAACTACATCATGCACAATTATTTGAATAGCGTGCAACACGCATTCGCAGCAGCCAAC
CTGGAAAAAGAAACCAATGAACAAATGCCATGGCTGAACGCTCTGCGTAGTCCCGACAGG
CAACTTGACGGGCGGTTTTCCGGCAGTCGAAACAACGATAGTCTGCTTCCCGCAGCCAAC
CAAGCCCTGGCGGCAGCACAGTACCGTGCTTGGTCCCAATTACAAAGTTCCGAAAAGCAG
CAGGACCGTTGGAACAACAGCAACAGTAACAACTCGGTATCCGTCCCACCCTACAGTCTT
TTGCTGCAACAACAAGTTATGCAGGCTGCGCTTGCTAGCGCCACCGCTGGACGACTGCCA
ATGTTTTCGCAAAATCTACTTCAACAGGCTCTGGCATTGAGCGCTGCGCAGTCCAGTCAC
CAAAACAGCGTGGAGCAAGGTCGCTCTCAAAACACTCAACGCTTTTCAAGCAAACCGGAA
AAAGTGCGTTTACCGTCCGATCAGCAAGATCAGGATGAACCCCTGGATTTGTCTGCAAAA
CCAAAACTGCTCAACAAACCAAACTATCAACAACAACACGAAAAAGATTTGAGCACAGAT
AGTGGAGTCGTAGAAAGGCAAATGTCACCGACTTCTTTGCTGAGCACCGCTGCTTCCAGT
AATCTACAACAGATGTTGCGCAACAGTGCCCTTCCGCCTACCGGCTTGTCTGGACTTCTG
GCCAATGGTTTGCAACTTCCAAACAACACAAATAGCGGCCTTGGATCATCAGAACTTGCC
TATGCTCAACATTTGCAGAATCTAATTGCTGGTGGGATGTACAATCGGGAAAACGGTATT
GGTGTTGGGGTATCCCCGTTTCCATCGCCACCAAATCGTTCGGCTTCGTCGCAGAGCAAC
TTGACAAAACGTGGAAGACCCAAGAAGAGATCACTGAACGAAGCCTCAGGGTTTTCACCT
GCAGGTCAGATGAACCCTACCAAGCACTTGTTGTATGACGCCATCACCAACCGACGAACT
TCGCCTTTTGCTGAACGGGAACTCAATGCTTTTCGCAAATCAATGCAACAAACCGGGTCA
CCCGGGTCCAACATGGACAACACATCGCGACTTACTGAAATGCCATACAAGTGTGATATC
TGCGACAAATGTTTTCAAAAACAAAGCTCACTCACTCGCCATAAATACGAACACACAGGC
AAACGCCCTCACCACTGCAACGAATGTGGCAAGTCGTTCAAACACAAACACCACTTGATT
GAGCACCAGCGTTTGCACAGCGGTGAAAAACCTTATCAGTGTGATAAATGTGGGAAACGC
TTCTCACACTCCGGCTCATATTCGCAGCACATGAACCACAGATATGCCTACTGCAAGCCT
GGTGATGCTTTGATGCAAGAATTACGACAACAAATGAAGAAAAGTGTTGATGCCAACACA
CAAAACAACAACACCGCTGAAAACAAGCCAAAAAAGCGTAAAAACTTCCGATCGTCAGCA
TCCCCGCAATCGCCATTTTACGGCGACACCAACTCAGCCAAGATGTCGCCGCCGGGCATT
GGCTCTGCTTTGTCGCCTTCGCGGGCTCATCTGCCCTCGTTTCTCAGCGGATATTTCTCG
AAAAATCCGAGCTCACTTTCGCCCAAAGATCACAGCGCCGAATCACCAGCCTCGTTTTAC
GAGAAGATGATGGAGCAAGCACAACGTCACATGGAACGTCAGGCATCTGCTGCCCTTTCA
CCAAACTCCGGCGTGAACGATCACATGCAGGAAACTTCAGCCAAACGAAGCAAAATGGAG
TCGATCAAGTCGGATTCGGATGAGTTTCCGAGAATCAAACAAGAAGTCAACCAACTTGAA
TCATCTATTGAACGCCAAGGCAGTTTATCTCCTGCTCAACAAGAAAAAGAAATTTCCGAC
GACAAAAAGCCAACATTCCGCAACCAGTCTGAAGAAAATGAGTTGTCGTCACTATCTCCC
TCGCCGTCGACGTCACTCTCCTCCCCTGCGCAGTCTCCTGGCTTGATGACGTCACCACAA
GGCAATCAAAGTCCATTGGATGGTCACGTGACCTTGAAAGGGTCGGCCTCTTTTTTGCAC
ATTCCCGTTGCAACAGATCTGTCATAA
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[493-529] 3.19E-9 - T[518-570] 1.3E-16 |
| Pfam |
Znf_C2H2_type (IPR013087) - T[496-518] 0.0021 - T[524-546] 0.0073 - T[552-572] 0.0063 |
| SMART |
Znf_C2H2_type (IPR013087) - T[496-518] 0.0038 - T[524-546] 0.06 - T[552-573] 0.21 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[496-523] 15.355 - T[524-551] 17.225 - T[552-580] 11.24 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[498-518] . - T[526-546] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZEB2_HUMAN | 85.714 % | 173 | 1.63E-44 |
| ZEB1_HUMAN | 57.931 % | 177 | 1.33E-45 |
| ZN232_HUMAN | 56.41 % | 103 | 1.61E-23 |