- Transcript 'KH2012:KH.C1.693.v2....' >
- Transcript 'KH2012:KH.C1.144.v4....' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Phmamm.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S515.g09641.01.t
Possible name(s)
Phmamm.CG.MTP2014.S515.g09641
Gene model
Location
S515 [93,178 / 97,584]
Amino acid sequence
Length: 1,309
>Phmamm.CG.MTP2014.S515.g09641.01.p
MSMTEKNQNNLQVMREEMLKSFLEIKYPFTNEESGNNESKLKFQGTMEAYQGVVAHSFSQ
FIKTVFEDCLTIMSKPPCSFAVLGLGSLAQREVTPFSDFESILVLQNNFEVDNVVMNYFR
NYAMLAQLMVIGLGETILPAMGIKSLNDFETEGGDWFVDVTTRRGLSFDGFLPHACKNPL
GRLPTENKPWHTELIQTVDNMLRFVDEEIELKEGYHLADIISYSVFVSGENKEGQPTGKE
VAATFHIQIRDKIAKKMKIQKCRSKVVDNIHNDISKYSYRKLNHGQAVHVKKDLYRGITI
LLPQLGMLLGINGESSYDIIQGLHEKKLINTEFCADIKIAVAIANYARAKTYFDQGAQKD
ALAGGKSNPDEKRSDVLETVYISGLQHLICVGTQFQESLVTSFDSNCGLKPLNTTDVFYS
HGSVLFRFEQYDQAIDCFTKQLKHVSNHDERNLFNEISDIHLMLGRCYYSKSQYEIAYQH
FFKAEENCHLDSNMERGRILLFQALNERKLRGVDTTQSLMKKAHGYFCKSTFSETDEYTI
ESFVNVLNDLCKENSDLVPELIEVMVIAGDRLLNESKVPFLAISHYQNALDKMEKYYKDE
RHILHILYVKEAIALCEGKMGHYNSAIDGWMEFAEQTITLSKQNAFKISYKPSYNPIESL
LQHLPDIKQACRCSQQRPYAIKICCKLVKVVDDGLKKETSNKLVRFSAMMHDMLGKLYDT
SKLYNIAIQHYKQASAAFQNLYPTTSYRKDEELAAMISMLDLEDNESFPTTLAKLRCFDP
QTIKCKIYLNFLKWLISGHKIFDDDLLTTILVVFDLALDSIKTDNDCRSLIVLLNKVVST
ESFTYAYDEIVRILIKSVSLFCSHSVRVYVKLIEKSMAVYCKLELEKKEFARLFVLAAEA
MIERFPKFAFNSETSTELRQILNNDKIFKTEKQAYFLLVAVFNHLEKIISAAEFLPDNSK
FLEAIEAYNLIVKLVADTQNIPSVEKLPIQAVAKLGNAWICILQNQTELVFKSLEKIFKH
IDTCIRLKDTMVHMTDVNTYLFKIAEELEKRSVHHLFLSYRDLLLNGNVSAILKPSNLKE
LRLLVQFTNTPHDGLTQVDRLPKILYKAASSPILFYCNDGFGKKKIVNLLLERIFALLTE
LPSDVDLCPLVYALDAICEHKVVCSAKLLLEQNKDLVSALKEKLPPKEVLVALLSFSTFC
IDNDLPTKAEQCSNEGLTSIQDLENSAMVIETKWFQTAFLTQLSWSAMKMEKPDLAWIHL
KSALSISMPLAEDPRCHEKHLAACEPDIRNMTAWNNIARYLFHSIKPIV
Nucleotide sequence
Length: 3,930
>Phmamm.CG.MTP2014.S515.g09641.01.t
ATGTCAATGACAGAAAAAAATCAAAACAATTTACAAGTTATGAGAGAAGAAATGCTCAAA
AGTTTTCTGGAAATTAAGTACCCATTTACAAACGAAGAAAGTGGAAACAATGAAAGTAAA
CTTAAATTTCAAGGAACCATGGAAGCATACCAAGGTGTTGTAGCACACAGTTTTTCGCAA
TTCATTAAAACCGTTTTTGAAGATTGTCTAACTATAATGAGCAAACCTCCATGTTCGTTT
GCAGTCTTAGGTTTAGGATCTCTCGCACAACGTGAAGTAACCCCATTTTCAGATTTTGAG
AGTATTCTGGTGTTGCAAAATAACTTCGAAGTTGACAATGTTGTGATGAACTACTTTCGT
AACTACGCAATGTTGGCTCAACTCATGGTCATCGGACTGGGAGAGACAATTTTACCAGCA
ATGGGTATAAAGTCTCTTAATGATTTTGAGACAGAGGGTGGTGACTGGTTTGTTGATGTT
ACAACAAGACGCGGACTCTCCTTCGACGGTTTTCTACCTCATGCTTGTAAAAATCCATTG
GGAAGATTGCCGACTGAAAACAAACCTTGGCACACAGAATTGATACAAACTGTGGATAAT
ATGTTGAGGTTTGTTGATGAGGAAATAGAGCTGAAGGAAGGTTATCACCTGGCAGATATT
ATTTCATATTCGGTATTTGTTTCTGGCGAAAACAAAGAAGGTCAACCAACTGGTAAAGAA
GTAGCTGCAACTTTTCACATCCAAATAAGAGACAAAATTGCTAAAAAAATGAAAATTCAA
AAATGCAGGAGCAAGGTGGTTGACAATATTCACAACGACATTTCAAAGTACAGTTATCGC
AAGTTAAACCATGGCCAAGCAGTTCATGTTAAGAAAGATCTTTACCGAGGAATTACTATA
TTGCTACCACAATTGGGAATGTTGCTTGGGATCAATGGAGAATCGTCATATGATATTATT
CAAGGCTTACATGAAAAGAAGTTAATTAACACTGAATTTTGTGCCGACATCAAAATTGCG
GTTGCCATTGCCAACTATGCTCGTGCAAAAACGTACTTTGACCAAGGGGCACAAAAGGAT
GCATTAGCGGGTGGGAAATCGAATCCTGATGAGAAAAGATCCGACGTTTTAGAAACGGTG
TATATTTCAGGCTTGCAACATTTGATTTGCGTCGGAACTCAGTTCCAAGAATCTTTAGTT
ACATCGTTTGACAGCAACTGTGGACTCAAACCATTAAACACAACTGATGTATTTTACTCA
CATGGAAGTGTTTTGTTTCGTTTTGAGCAATACGATCAAGCGATTGACTGTTTTACGAAG
CAATTGAAACACGTTTCAAATCACGACGAAAGGAATCTTTTTAATGAAATTTCCGACATT
CACTTAATGTTAGGCAGATGTTATTACAGCAAAAGTCAATATGAAATTGCTTATCAACAT
TTTTTCAAAGCTGAAGAAAATTGCCACTTGGACAGTAATATGGAACGAGGTCGCATTTTG
CTGTTCCAGGCACTTAACGAAAGAAAACTAAGGGGCGTGGACACAACTCAAAGTTTGATG
AAAAAGGCACATGGTTACTTTTGCAAGTCAACATTTTCTGAGACCGACGAATATACCATT
GAGTCGTTTGTCAACGTTCTGAACGATTTGTGCAAAGAGAATTCCGATTTAGTTCCAGAA
CTAATTGAAGTCATGGTGATTGCAGGTGACCGCTTGTTGAATGAAAGCAAAGTTCCATTC
TTAGCAATCTCGCATTATCAAAATGCATTAGACAAGATGGAAAAATACTACAAGGACGAA
AGACACATATTACACATTTTGTATGTAAAGGAAGCGATAGCGTTATGTGAAGGAAAGATG
GGTCACTATAATTCCGCGATTGATGGCTGGATGGAATTTGCTGAACAAACCATAACCTTG
TCAAAGCAAAATGCTTTTAAAATCTCGTACAAACCAAGTTACAATCCAATCGAATCTTTG
TTACAACATCTGCCTGACATAAAACAAGCATGTCGCTGCAGTCAACAACGCCCCTATGCA
ATTAAAATCTGTTGCAAACTTGTCAAGGTTGTCGATGATGGGTTGAAAAAGGAAACTTCC
AACAAACTCGTTCGATTCAGTGCAATGATGCACGACATGCTTGGTAAACTTTACGATACC
AGCAAGTTATACAATATTGCTATTCAACACTATAAACAGGCAAGTGCTGCTTTCCAGAAT
TTGTACCCGACGACAAGTTACAGAAAAGACGAAGAGCTCGCTGCCATGATATCAATGTTG
GATCTGGAAGACAACGAAAGCTTTCCGACAACATTAGCAAAACTCAGGTGTTTTGATCCG
CAAACCATTAAATGCAAGATATACTTGAATTTTTTGAAATGGTTGATTAGCGGTCATAAG
ATTTTTGATGATGATCTGCTAACTACCATTCTTGTCGTTTTTGACTTGGCCTTGGATTCC
ATAAAAACTGATAATGACTGCAGGTCTTTGATCGTTTTGCTAAACAAAGTGGTTAGCACT
GAATCCTTTACGTATGCATATGACGAAATTGTCAGAATTCTTATAAAATCAGTTTCTCTC
TTTTGCTCACATTCCGTTAGGGTTTATGTAAAGTTAATAGAAAAATCAATGGCAGTTTAT
TGCAAATTAGAATTGGAGAAAAAAGAATTTGCAAGGTTATTTGTTCTTGCAGCGGAAGCA
ATGATTGAACGATTTCCTAAATTTGCTTTCAATTCAGAAACTTCGACAGAATTACGACAG
ATATTAAATAACGACAAAATATTTAAAACTGAAAAGCAAGCATATTTTCTTCTTGTTGCT
GTATTTAACCACTTAGAAAAGATAATTTCAGCAGCAGAATTTTTACCAGACAACAGTAAA
TTTTTGGAAGCAATCGAGGCCTACAATCTTATTGTGAAATTGGTGGCAGATACACAAAAT
ATACCAAGCGTTGAAAAGCTTCCAATACAAGCTGTTGCAAAGCTCGGTAATGCATGGATT
TGCATCCTACAAAACCAAACCGAGCTTGTATTTAAATCATTGGAGAAAATTTTCAAACAT
ATTGATACGTGTATACGTTTAAAGGACACAATGGTTCACATGACGGATGTCAACACATAC
CTGTTTAAAATAGCTGAAGAACTTGAAAAGCGCAGTGTACATCATCTTTTTCTTAGTTAC
AGAGATTTGCTGCTAAACGGAAACGTAAGCGCGATTTTGAAACCAAGCAACCTCAAGGAA
CTGCGTTTGCTTGTTCAGTTTACGAACACACCACATGATGGACTAACTCAAGTTGACAGA
TTGCCGAAAATCCTCTACAAAGCCGCTTCGTCGCCAATCTTATTTTATTGTAATGACGGC
TTTGGTAAGAAGAAAATCGTTAATTTGCTGCTTGAAAGAATTTTCGCACTCCTAACCGAA
CTTCCAAGCGACGTCGATCTTTGTCCCTTGGTTTATGCATTGGATGCGATTTGTGAACAC
AAAGTTGTCTGTTCCGCTAAATTGCTTCTGGAGCAAAACAAGGATCTTGTTTCTGCACTG
AAAGAAAAACTTCCACCTAAAGAAGTCCTAGTGGCTCTCCTAAGCTTTTCAACATTCTGC
ATAGACAACGATCTTCCTACAAAAGCCGAACAATGTTCCAATGAAGGTTTGACGTCGATA
CAAGATTTGGAAAACAGCGCAATGGTGATAGAAACTAAATGGTTTCAAACCGCATTTTTA
ACACAATTAAGCTGGTCCGCCATGAAAATGGAGAAGCCGGATTTGGCCTGGATTCATCTT
AAATCGGCATTAAGCATTTCTATGCCACTCGCCGAGGACCCTAGATGTCACGAAAAACAT
TTAGCTGCTTGTGAGCCTGATATCCGGAACATGACAGCATGGAACAATATTGCTAGATAC
TTATTCCACAGCATTAAACCCATTGTGTAA
| Pfam |
GlnD_Uridyltrans_N (IPR005105) - T[47-124] 2.5E-5 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[334-765] 2.1E-10 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[415-448] 8.644 - T[458-491] 6.815 - T[708-741] 5.753 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[415-491] 8.856 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[415-487] 1.9E-8 |
| SMART |
TPR_repeat (IPR019734) - T[415-448] 0.56 - T[458-491] 13.0 - T[708-741] 36.0 |
| Protein Name | Identity | Bit Score | e-value |
|---|