- Transcript 'Phmamm.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S517.g09655.01.t
Possible name(s)
RASSF1; RASSF3; RASSF5
Gene model
Location
S517 [24,623 / 32,338]
Amino acid sequence
Length: 685
>Phmamm.CG.MTP2014.S517.g09655.01.p
MANSSEADLMKNLSPHERNRLMRHVGQSGPGSPKKSASKVNNQAPKPFVVGTASSGRGIS
SVNPPRPKNTVPNRWQNNNSNFTPAKGLSKPERSPSPKVSKDLADIMPKLNEAHVQMFTS
KEAAINPSLHQAKKKAPTPVATQVTPVTKETDTSVKSMANRFQPNQTKNNAKSPPAFPKK
QSYPQPKPLIEPVKKTVPASVQAEKKPTPMASPPKPTTPAVVARVNATNSASTKWSPPSV
AAAPPPAAVQNTAANKPKPAANKPPKAWQRAGPPLSQEKSTSPSTPPTAVVAPMQPKPTS
PPVKKATQPHSPDVGRSRAVSSPVIPPKSRSDIVVSYQRSSEDVVLPEMVSNKAEKQSPP
QQQRKPRANSEITKKTKATTNIKPAKVGHDFQPHELKEWVNWCDACGSVILSLFGKCVTC
TKCKMVCHGKCALTVSLTCEADQQQARSLTLNETSALSLYKTIVQETTDESTLKEYNTIQ
RVISIEEIQQKIEEFNLTVKGSQQMTLQEDGETFRGFIRVTMNLTRPVSVMDAAKTSRKN
PKKSSFYIDKGAVKALHLTSDTTAAQVVQALLTKYNISDNPMKFALFEKQFREEGHVILR
KMLPKERPLFLRLLWGNGSSEKKGFILQENESRDIHWESFSVGELQMFIKILDKEENDYI
TEIKRKYKNRSQDIRQAIDHQNKKG
Nucleotide sequence
Length: 2,058
>Phmamm.CG.MTP2014.S517.g09655.01.t
ATGGCAAATTCTTCTGAGGCCGATTTGATGAAAAACTTATCTCCTCATGAAAGAAATAGA
TTAATGCGACATGTTGGTCAGTCAGGCCCTGGAAGTCCCAAGAAAAGTGCCTCAAAGGTC
AACAATCAAGCACCAAAGCCATTTGTTGTTGGAACAGCTTCAAGTGGACGTGGTATATCA
TCGGTCAATCCGCCAAGACCAAAAAACACGGTGCCCAATAGATGGCAAAACAACAATTCA
AATTTTACACCGGCCAAGGGATTATCCAAACCTGAAAGGTCACCCAGTCCCAAGGTTTCA
AAAGACCTTGCTGACATAATGCCCAAACTGAATGAAGCACATGTTCAGATGTTTACATCT
AAAGAGGCTGCAATCAATCCAAGTTTGCATCAGGCAAAAAAGAAAGCACCAACTCCGGTT
GCCACACAAGTAACACCTGTTACTAAGGAAACTGACACATCAGTAAAATCAATGGCAAAC
AGGTTTCAACCAAATCAAACAAAGAACAATGCAAAGTCACCACCAGCTTTTCCAAAAAAA
CAATCATATCCACAACCAAAGCCTCTTATTGAACCTGTTAAGAAGACAGTTCCAGCTTCA
GTTCAAGCAGAAAAGAAACCCACCCCAATGGCATCTCCACCAAAACCAACAACTCCAGCA
GTGGTTGCAAGAGTCAATGCAACAAACAGTGCCTCCACAAAATGGTCTCCTCCAAGTGTT
GCAGCTGCTCCACCACCAGCAGCAGTACAAAACACTGCAGCAAATAAACCAAAGCCTGCA
GCAAACAAACCACCTAAAGCTTGGCAACGGGCTGGTCCACCACTAAGTCAAGAAAAATCA
ACCTCACCCAGCACCCCACCTACTGCTGTAGTTGCGCCGATGCAACCTAAGCCTACATCG
CCGCCTGTGAAAAAAGCAACTCAGCCACATAGCCCAGATGTAGGCCGATCGCGAGCTGTT
TCGTCACCAGTCATACCCCCTAAGTCACGCAGTGATATTGTTGTGTCATATCAACGATCA
AGCGAAGATGTGGTACTACCAGAGATGGTGTCAAATAAGGCAGAAAAGCAATCTCCCCCA
CAACAGCAAAGAAAACCCAGAGCTAATTCTGAGATCACAAAAAAAACAAAAGCCACTACA
AACATAAAACCAGCCAAGGTGGGTCATGATTTCCAACCTCACGAATTAAAGGAATGGGTG
AACTGGTGCGATGCCTGTGGAAGTGTTATTCTTTCGCTTTTCGGAAAATGTGTAACATGT
ACAAAATGCAAGATGGTGTGTCATGGAAAGTGTGCTCTTACAGTTTCTCTCACCTGTGAA
GCAGATCAGCAACAAGCACGAAGTTTGACGCTAAATGAAACGAGTGCTTTGAGCCTTTAC
AAAACTATTGTACAGGAAACAACTGACGAGTCAACACTGAAGGAATATAACACAATTCAA
CGGGTCATCTCTATTGAGGAGATTCAACAAAAAATTGAGGAATTCAATCTTACAGTTAAA
GGAAGTCAACAAATGACACTGCAAGAGGACGGGGAAACATTTAGAGGTTTTATCCGTGTG
ACAATGAACCTTACTCGACCAGTCAGTGTAATGGATGCTGCTAAAACTTCCAGGAAAAAT
CCAAAGAAATCGTCTTTTTACATTGACAAGGGAGCAGTCAAGGCTTTGCATTTGACATCG
GACACAACAGCAGCGCAGGTGGTTCAAGCTCTTCTTACCAAATACAACATCAGTGATAAT
CCAATGAAGTTTGCTCTGTTTGAGAAGCAGTTCAGAGAAGAAGGACATGTGATTTTGAGA
AAGATGCTCCCCAAAGAGAGGCCGTTGTTTCTTCGACTTTTATGGGGAAATGGAAGCAGT
GAAAAGAAGGGCTTTATTTTGCAAGAAAATGAATCTAGAGATATACATTGGGAGTCATTT
TCTGTTGGAGAACTGCAGATGTTTATCAAGATCCTCGATAAAGAGGAAAATGATTACATC
ACAGAAATCAAACGCAAGTACAAGAACCGATCCCAAGACATTCGGCAAGCAATAGATCAC
CAGAACAAGAAAGGATAA
| PANTHER |
C-RASSF (IPR033614) - T[376-680] 2.2E-77 |
| ProSiteProfiles |
PE/DAG-bd (IPR002219) - T[388-439] 11.337 |
| ProSitePatterns |
PE/DAG-bd (IPR002219) - T[389-439] . |
| SMART |
PE/DAG-bd (IPR002219) - T[389-439] 1.5E-4 |
| CDD |
PE/DAG-bd (IPR002219) - T[389-439] 4.40491E-7 |
| SMART |
RA_dom (IPR000159) - T[538-632] 2.3E-13 |
| ProSiteProfiles |
RA_dom (IPR000159) - T[540-632] 19.61 |
| Pfam |
RA_dom (IPR000159) - T[547-631] 7.7E-14 |
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[553-630] 5.79E-9 |
| ProSiteProfiles |
SARAH_dom (IPR011524) - T[634-681] 11.867 |
| Pfam |
SARAH_dom (IPR011524) - T[640-678] 6.9E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RASF5_HUMAN | 36.334 % | 197 | 1.96E-56 |
| RASF1_HUMAN | 35.693 % | 184 | 1.54E-52 |
| RASF3_HUMAN | 35.025 % | 119 | 1.64E-30 |