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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  2. Region 'REG00001294' > 
  3. Transcript 'Phmamm.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S520.g09705.02.t

Possible name(s)

CDT1

Gene model

Phmamm.CG.MTP2014.S520.g09705

Location

S520 [79,726 / 82,948]

Sequences

Amino acid sequence

Length: 558

>Phmamm.CG.MTP2014.S520.g09705.02.p
YLSPKSILKQNSTVSEKSPAKDKISSKTSEPCSISPPVSPSKRSCNDTDEDPGKKRGRAS
PTSKEQNESISAQSNTMATLNKKSSQVKVTRNARKRLELKENKDDSKSCEQPTATNIEED
TLVTVKNKLSTRSLRTRGKQGDVSNAVNIAEKLLAKKKFNLISCAQESKETIQESLKSKS
NLKDLQETLLKMRDAKKKAKATKSKSKAEKESNKSAEVVKVVKKKDYAYSRFHTLAQEIP
KGLALPFKYKILQEMFRSADTVIGMLFNRQETATWMKVQHSVKDMINKNFEKKDLGQIKH
VFPEAYLYRQEKGIPTYSDHMKSSDYQLTLEPILDSEELELLENQAKKLTSGMLVRRRHH
FHLQLLDIVKSHHQAFLSSLDPSVTVENSKLRRWHPQFKVDQVPDIPLDDLPLPPDHEQK
KCYSAKEVLDKAKDRLTKKAVDALKKVAEKCVKTPDKVKEGCIEENNNVTPVKKTPPKPA
IKGVSKSLLDKIREKEADKKLRLMIRSDEDDKKLDMMRQLPDISKALRMLFITEKKGALP
LDYVAFKLIAACPSVCTS

Nucleotide sequence

Length: 1,674

>Phmamm.CG.MTP2014.S520.g09705.02.t
TATTTGAGCCCGAAATCAATCCTTAAACAGAACTCCACTGTCTCGGAAAAATCACCTGCC
AAAGACAAAATTTCCTCCAAAACTAGTGAACCTTGCAGCATTTCACCACCAGTGTCACCA
AGCAAAAGATCATGTAATGATACTGATGAGGACCCTGGTAAAAAACGAGGAAGGGCAAGT
CCTACCTCAAAGGAACAAAATGAATCTATCTCAGCGCAATCCAACACAATGGCGACGTTA
AACAAAAAATCTTCACAAGTGAAAGTAACAAGAAATGCTCGCAAACGTTTGGAGTTAAAA
GAAAATAAAGATGATTCGAAATCATGTGAACAACCAACTGCAACCAATATAGAAGAAGAC
ACATTAGTAACTGTAAAAAACAAGCTTTCCACAAGAAGTTTACGAACCCGAGGTAAACAA
GGGGATGTGTCAAATGCTGTCAATATAGCTGAAAAACTTCTGGCAAAGAAAAAGTTTAAC
CTTATTTCATGTGCACAGGAATCAAAAGAAACTATTCAAGAATCACTAAAATCAAAAAGC
AATTTGAAAGACTTGCAGGAAACACTTTTAAAAATGCGTGATGCCAAAAAGAAGGCAAAA
GCAACCAAATCAAAATCAAAAGCTGAAAAAGAATCAAACAAATCTGCTGAAGTTGTCAAA
GTTGTAAAGAAAAAAGATTATGCTTACAGCAGGTTTCACACCTTGGCTCAAGAAATTCCC
AAAGGCTTAGCTCTTCCATTTAAATATAAGATATTGCAAGAAATGTTTCGAAGTGCTGAT
ACAGTAATCGGAATGTTGTTCAACAGACAAGAAACTGCTACATGGATGAAGGTTCAACAT
TCTGTTAAAGATATGATCAACAAGAACTTTGAAAAGAAGGATTTAGGTCAAATCAAACAT
GTTTTTCCTGAGGCGTACCTCTATCGCCAGGAGAAGGGCATTCCAACTTACAGCGATCAC
ATGAAATCCTCTGATTATCAGCTGACCCTTGAACCTATTCTGGACAGTGAAGAATTGGAA
TTGTTGGAAAATCAAGCAAAGAAATTAACAAGTGGAATGTTAGTTCGACGTCGACATCAT
TTCCACCTCCAGTTGCTTGATATTGTTAAAAGCCATCATCAGGCGTTTTTATCTTCCTTG
GATCCTTCAGTGACTGTTGAAAACAGCAAACTTCGTCGCTGGCACCCACAGTTTAAGGTG
GACCAGGTTCCAGACATCCCACTGGATGACCTTCCTCTTCCTCCTGATCATGAACAGAAA
AAATGTTACTCTGCCAAGGAAGTTCTGGATAAGGCCAAAGACAGACTTACCAAAAAGGCT
GTGGACGCCTTGAAGAAGGTTGCAGAGAAATGTGTAAAAACACCTGACAAAGTGAAAGAA
GGTTGCATTGAGGAAAACAATAATGTAACACCTGTAAAGAAAACTCCACCAAAACCTGCT
ATTAAGGGTGTTTCAAAATCACTCCTAGACAAGATTCGTGAAAAGGAAGCTGACAAAAAG
CTCCGTCTCATGATCCGATCAGATGAAGATGATAAGAAGCTTGATATGATGAGACAACTA
CCTGATATTTCAAAGGCTTTAAGAATGCTCTTCATAACTGAGAAGAAAGGAGCACTACCA
TTAGATTATGTTGCTTTCAAACTGATCGCTGCCTGTCCAAGTGTATGCACATCA

InterProScan

SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[228-415] 2.07E-49
SMART
CDT1_Gemini-bd-like (IPR014939) - T[245-413] 2.5E-66
Pfam
CDT1_Gemini-bd-like (IPR014939) - T[245-412] 4.4E-54
Pfam
Cdt1_C (IPR032054) - T[487-554] 1.2E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CDT1_HUMAN 37.824 % 277 2.03E-86