- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Phmamm.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S522.g09727.02.t
Possible name(s)
ALK; LTK; ROS1
Gene model
Location
S522 [40,041 / 52,105]
Amino acid sequence
Length: 587
>Phmamm.CG.MTP2014.S522.g09727.02.p
MRLDAACNLFSNSLPPPSVTETTGSSILLNISSVQTTATSFPPACSPYDIVNTSQVHFSV
LYQNTNSVSCLSSPSCMESRIEDVENPVLNNLRPNTSYEIQIAVYRTLHNSTAVSISQQL
LVNTTCGISLEPANLQCLPQSFNEVYIVWEPPVILNTEEVRYQVAVQTGLHDIPTGTLQF
TKFTQQTLLYQVRAFPVDCPALEGSYSSSNITCAPFDAPKQLTIVDVTSHTITVTWEPYP
PGQIRQIVVLWSLRSERDKWTESLPLEGSATRETITDLIADTGYLLRSKITYVTGRVAES
NQQVEADTLRGRPNSPTNVTIKGETPDGVICWNTPISQDDSSDIIEYVIEARQVYAVNGA
GRGDTSAVTSPYQFTLPIDNSRYKWIVIGSSVGTTFFVLIIILAFVCYKCSITRRRKRIK
KQLPGEITAIHINYGMDMELAQIRHMTSLAMAAASNGGRINLPDNYMKNLPLFPRDKLAL
DTLLGSGAFGEVYKGIAIDIRGGEAGIEYPVAVKTLKDGASDSEKCEFLMEAYFMSLFDH
PNIISLLGVCLDNEPQFLILELMEGGDLLKYLRQARQTQVSGVLKSK
Nucleotide sequence
Length: 1,764
>Phmamm.CG.MTP2014.S522.g09727.02.t
ATGCGACTAGACGCAGCCTGCAACTTATTCTCCAACTCTTTGCCTCCACCAAGTGTTACT
GAGACGACCGGAAGTAGTATTTTGCTTAATATCTCATCCGTTCAAACTACAGCTACCTCT
TTTCCCCCTGCTTGCTCACCCTATGATATTGTTAACACATCACAAGTGCACTTCTCTGTT
TTGTATCAAAACACAAACTCAGTTAGCTGTTTGTCAAGTCCAAGCTGCATGGAAAGTAGA
ATTGAAGACGTCGAAAACCCAGTTTTGAACAATCTTCGTCCCAACACAAGTTACGAAATA
CAAATTGCTGTTTATCGAACATTACATAACTCAACAGCTGTCTCCATTTCACAACAACTA
CTTGTCAACACAACTTGTGGAATTTCATTAGAACCAGCAAATCTCCAATGCTTGCCACAA
TCATTCAATGAGGTTTATATTGTATGGGAACCACCAGTCATTCTTAACACAGAAGAAGTA
AGATATCAGGTTGCTGTTCAAACTGGATTACATGACATCCCAACAGGCACCCTTCAGTTC
ACGAAATTCACACAACAAACACTCCTTTATCAGGTTAGGGCATTTCCCGTCGACTGTCCG
GCGCTTGAGGGCTCATACAGCTCATCCAACATAACTTGCGCTCCGTTCGACGCCCCAAAA
CAATTGACGATTGTTGACGTCACAAGCCACACAATCACGGTCACGTGGGAGCCGTACCCG
CCGGGACAGATTCGTCAAATCGTTGTCTTGTGGTCCCTGCGATCAGAACGAGACAAGTGG
ACCGAAAGTCTACCATTAGAGGGCAGTGCTACACGAGAGACGATCACTGATTTGATTGCT
GACACTGGTTACTTGTTGAGATCTAAAATTACTTACGTCACGGGAAGAGTAGCAGAGTCC
AATCAACAGGTGGAGGCAGACACGTTGAGGGGAAGACCCAACTCCCCAACCAACGTTACA
ATCAAGGGTGAAACACCTGATGGGGTAATCTGCTGGAACACACCCATTTCACAAGACGAC
TCCTCGGATATTATCGAATACGTTATTGAGGCTAGGCAAGTGTACGCAGTGAACGGCGCC
GGACGAGGGGACACCAGCGCCGTTACGTCACCGTACCAGTTTACACTCCCGATCGACAAT
AGCAGATACAAATGGATTGTAATAGGATCATCTGTAGGAACAACTTTCTTTGTTTTAATC
ATCATTCTCGCATTCGTATGTTACAAGTGCAGTATAACAAGGCGACGAAAACGAATCAAG
AAACAGCTTCCTGGCGAAATCACGGCCATTCACATTAACTATGGCATGGATATGGAATTA
GCACAGATACGGCATATGACAAGTCTTGCAATGGCGGCGGCCAGCAACGGTGGAAGGATA
AACTTGCCTGACAACTACATGAAGAACCTCCCTCTATTTCCACGGGATAAACTTGCACTT
GATACTTTACTAGGAAGTGGAGCTTTTGGCGAAGTGTACAAAGGAATAGCGATTGACATA
AGAGGTGGAGAAGCTGGAATCGAATACCCAGTAGCAGTAAAAACTTTGAAAGATGGGGCA
AGTGACAGTGAAAAGTGCGAGTTTCTCATGGAAGCTTACTTTATGAGTTTATTTGATCAT
CCCAACATCATTTCACTTCTGGGAGTCTGTCTTGATAACGAGCCTCAGTTTCTGATCCTT
GAACTTATGGAGGGAGGTGACTTACTAAAGTATCTGCGGCAAGCTCGCCAAACTCAAGTG
AGTGGAGTCCTCAAGTCAAAATAA
| SMART |
FN3_dom (IPR003961) - T[11-111] 8.5 - T[129-204] 76.0 - T[216-297] 0.28 - T[313-395] 29.0 |
| SUPERFAMILY |
FN3_sf (IPR036116) - T[47-184] 7.1E-10 - T[217-371] 9.53E-13 |
| ProSiteProfiles |
FN3_dom (IPR003961) - T[131-217] 6.912 - T[218-311] 15.337 |
| Gene3D |
Ig-like_fold (IPR013783) - T[216-314] 1.1E-10 |
| CDD |
FN3_dom (IPR003961) - T[217-287] 2.88358E-8 |
| Pfam |
FN3_dom (IPR003961) - T[217-287] 2.7E-6 |
| SUPERFAMILY |
Kinase-like_dom_sf (IPR011009) - T[463-577] 8.11E-25 |
| ProSiteProfiles |
Prot_kinase_dom (IPR000719) - T[478-587] 16.132 |
| SMART |
Tyr_kinase_cat_dom (IPR020635) - T[478-587] 2.1E-5 |
| Pfam |
Ser-Thr/Tyr_kinase_cat_dom (IPR001245) - T[479-579] 5.9E-24 |
| ProSitePatterns |
Protein_kinase_ATP_BS (IPR017441) - T[484-514] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FER_HUMAN | 41.071 % | 87.8 | 4.8E-18 |
| ROS1_HUMAN | 30.58 % | 174 | 6.8E-46 |
| ALK_HUMAN | 34.759 % | 90.5 | 1.05E-18 |