Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S526.g09765.01.t

Possible name(s)

SLC10A2; SLC10A3; SLC10A5

Gene model

Phmamm.CG.MTP2014.S526.g09765

Location

S526 [5,820 / 7,179]

Sequences

Amino acid sequence

Length: 452

>Phmamm.CG.MTP2014.S526.g09765.01.p
MCFWATIFSSGTVKCETNISSLNENSNISYPLESNWLMEVYEDDISPFTYNCSKPLGKNN
LSHHFVLFETHDLAIGGIWMENSSVIETHMSCKNGTVKMFVKAGHLGITSIRISQSSDEV
GHTVLNTGELSVHVLRKVTLFDELAVFVLGPLILFNKCAFGAKIEVDMLKRIVTHPVELS
LCLLTQFIFLPLTAVGLGTFLQLDQILALALLVSAVCPGGGGGYVFSFLVEGDITVAITA
SLVSTLVAMVAMPAVIGTYSYFAHIPNNIVIPYIKILLMLLAIATPITLGMILRRKKPNL
AKKLITVIKPLSLFLIFAGLVVVVVTSKYVMYGPKVGYILAILVPFSGLFIATVLCKLVC
LDWPLTKAVALESGLKNTVLGVAVIELSFPQPQADLASILIVMITVGQVVVAMTWYFVHL
LSKSFTQSRQKKDREEDPLETEMFLQHSSSAF

Nucleotide sequence

Length: 1,359

>Phmamm.CG.MTP2014.S526.g09765.01.t
ATGTGTTTCTGGGCTACTATATTTTCATCCGGAACTGTAAAATGTGAGACAAACATAAGC
AGCCTAAATGAAAATTCCAACATAAGTTATCCCCTGGAAAGCAACTGGCTGATGGAAGTA
TATGAAGATGATATTTCGCCGTTTACATATAATTGTTCAAAACCATTGGGAAAAAACAAC
CTGTCACATCATTTTGTGTTATTTGAAACACATGATTTGGCGATTGGGGGAATATGGATG
GAAAACAGTTCTGTAATAGAGACTCATATGAGCTGCAAAAATGGTACTGTTAAAATGTTT
GTCAAAGCAGGGCATTTGGGAATAACTTCTATTCGCATCTCACAATCAAGTGATGAAGTT
GGCCATACAGTTTTAAATACTGGTGAACTTTCAGTGCATGTTTTAAGAAAAGTTACTTTG
TTTGATGAACTGGCAGTTTTTGTCCTTGGACCTTTAATACTTTTTAACAAATGTGCTTTT
GGCGCCAAAATAGAAGTTGACATGCTAAAAAGGATTGTTACCCACCCAGTGGAACTTTCA
CTTTGTTTGCTGACACAGTTTATATTTTTACCTTTGACTGCAGTAGGGTTGGGAACTTTT
TTGCAACTTGATCAAATACTTGCCTTGGCCTTGCTGGTATCTGCTGTTTGTCCGGGTGGC
GGGGGTGGTTATGTTTTTAGTTTTTTAGTGGAAGGTGATATTACTGTTGCTATAACAGCT
AGTCTTGTGTCCACATTAGTTGCCATGGTGGCAATGCCCGCTGTTATTGGCACTTACAGT
TACTTCGCACATATACCAAACAACATTGTTATACCATACATAAAAATATTGTTAATGCTT
CTAGCCATTGCTACCCCCATAACGTTGGGAATGATTCTCAGAAGGAAAAAACCAAATCTT
GCCAAGAAACTGATCACTGTGATAAAACCTTTGAGTCTGTTTTTAATATTTGCTGGACTG
GTAGTAGTGGTTGTAACATCCAAATATGTGATGTACGGCCCAAAAGTTGGGTACATATTG
GCCATTCTGGTTCCATTTAGTGGCTTGTTCATAGCTACTGTCTTGTGCAAACTTGTATGC
CTGGATTGGCCTTTAACCAAAGCTGTGGCACTGGAAAGTGGTCTTAAAAATACAGTTCTT
GGTGTTGCTGTCATTGAATTATCTTTTCCCCAACCCCAGGCTGACCTGGCATCAATTCTT
ATTGTGATGATTACAGTCGGTCAAGTTGTGGTTGCAATGACTTGGTATTTTGTGCATCTG
CTTAGCAAAAGTTTCACACAGAGTAGACAAAAAAAAGATAGGGAGGAAGACCCACTGGAG
ACTGAAATGTTTTTACAACACTCGAGTAGTGCATTTTAG

InterProScan

PANTHER	Bilac:Na_transpt (IPR004710) - T[130-434] 5.2E-62
Pfam	BilAc:Na_symport/Acr3 (IPR002657) - T[152-330] 3.1E-24

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
NTCP2_HUMAN	23.986 %	100	1.41E-23
P3_HUMAN	36.179 %	143	8.21E-38
NTCP5_HUMAN	33.688 %	147	1.72E-39