- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C1.263.v1....' >
- Transcript 'KH2012:KH.L117.1.v3....' >
- Transcript 'Phmamm.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S52.g01937.01.t
Possible name(s)
EDEM1; EDEM2; EDEM3
Gene model
Location
S52 [149,339 / 155,953]
Amino acid sequence
Length: 518
>Phmamm.CG.MTP2014.S52.g01937.01.p
MCVKYLWWLTALLFVQYSFANNDSSTPILNKDQLFLDEFWGNYYGEKYRHFSEVDRLKSK
EDARNMFYFGYDSYMKYAFPQDELNPIDCSGRGPDVLNPSNLNINDVLGNFSLTLVDSLD
SLAVLGNALEFKQAVKIVIDTVHFDLNSTVQVFETNIRVLGSLLASHLIIVDPKQPFGDM
RPHGYDNELLDMAHDLAVRLLPAFDSAKYGIPFPRVNLRHGVPNNTLTHTATAGAGSLLL
EFGTLSRLLGDPTFENAARRAVDEIWGRRNEKTGLLGIAIDVNTGKWMGRQSGLGAGVDS
FFEYLLKSYILFGEERDLEMFNEALQNIKDHLRRGRTHCNSGMGDPPIYVNVDLSSGNII
NTWVDSLQAFLPGLLVLNGDIEEAICCHALYYTIWKKFDALPERFNWHLKLPDVQFYPLR
PELIESTYLLYRATKNPFYLHVGREILDSFELHARTECGYASLHNVVDKSQEDRMESFFL
SETCKYLYLVSKFIYMTSSFKVYDRTGSVLFGRHNAVI
Nucleotide sequence
Length: 1,557
>Phmamm.CG.MTP2014.S52.g01937.01.t
ATGTGTGTCAAGTATCTCTGGTGGCTAACTGCCTTGCTGTTTGTCCAATACTCATTTGCC
AACAATGACTCAAGTACGCCGATTTTAAACAAAGACCAACTGTTTCTTGATGAATTTTGG
GGCAACTATTATGGGGAAAAATATCGCCACTTTTCTGAAGTTGATCGTTTGAAAAGCAAA
GAAGATGCCAGGAACATGTTTTATTTTGGATATGACAGCTACATGAAATATGCCTTTCCT
CAAGATGAACTGAATCCTATTGACTGCTCTGGACGTGGACCTGATGTTTTAAACCCATCA
AACTTAAACATCAATGATGTTCTGGGCAATTTTTCCCTTACACTTGTTGACTCCTTGGAC
TCTCTAGCGGTGCTGGGAAATGCTTTAGAGTTCAAACAAGCGGTGAAAATTGTCATAGAT
ACTGTGCACTTTGATCTTAACTCAACTGTACAAGTTTTTGAGACAAATATCAGGGTTCTT
GGTTCGCTTCTGGCTTCACATCTTATAATTGTCGATCCGAAACAACCATTTGGTGACATG
AGACCACATGGTTATGATAACGAACTTCTTGATATGGCACATGATCTTGCTGTAAGGTTG
CTACCTGCCTTCGATTCTGCTAAATATGGCATTCCATTTCCAAGGGTTAATTTGCGACAT
GGAGTCCCAAATAACACACTCACTCACACGGCAACTGCTGGGGCTGGATCTTTGTTGCTG
GAATTCGGAACACTCAGTCGCTTGCTTGGTGACCCAACCTTTGAAAATGCAGCTCGACGT
GCAGTGGATGAAATATGGGGCAGGCGTAATGAGAAAACAGGCCTTCTTGGGATTGCCATT
GATGTGAACACTGGCAAGTGGATGGGAAGACAAAGTGGACTTGGCGCTGGGGTTGACTCA
TTTTTCGAATATCTTTTAAAGTCATACATCCTGTTCGGGGAAGAAAGAGATTTGGAAATG
TTTAACGAAGCGCTGCAAAATATCAAGGACCATTTGCGACGAGGGCGCACCCATTGCAAC
AGTGGTATGGGTGATCCCCCTATTTATGTGAATGTGGATTTATCCAGTGGAAATATTATC
AACACTTGGGTCGACTCATTACAAGCCTTCTTACCTGGACTGCTGGTGCTCAACGGTGAT
ATAGAAGAGGCCATTTGTTGTCATGCACTTTACTACACTATATGGAAGAAATTTGATGCC
TTGCCTGAGCGATTTAATTGGCACCTCAAACTTCCTGATGTTCAGTTCTACCCCTTAAGG
CCTGAACTAATTGAAAGCACCTATTTACTATACAGAGCGACAAAGAACCCATTCTACTTA
CACGTTGGCCGTGAGATCTTGGACTCTTTTGAGCTCCATGCTCGAACTGAGTGTGGTTAC
GCATCGCTGCACAACGTGGTGGACAAGTCGCAGGAGGATCGGATGGAATCTTTTTTCCTC
AGCGAAACTTGCAAATACTTATATTTGGTAAGCAAGTTCATCTATATGACATCAAGCTTC
AAAGTGTATGACAGAACTGGAAGTGTTTTGTTTGGTCGGCATAATGCAGTCATATGA
| Gene3D |
6hp_glycosidase-like_sf (IPR012341) - T[49-495] 3.3E-144 |
| SUPERFAMILY |
Seven-hairpin_glycosidases (IPR036026) - T[56-490] 5.76E-133 |
| PRINTS |
Glyco_hydro_47 (IPR001382) - T[66-86] 3.1E-52 - T[112-126] 3.1E-52 - T[149-167] 3.1E-52 - T[203-222] 3.1E-52 - T[295-312] 3.1E-52 - T[363-379] 3.1E-52 - T[418-442] 3.1E-52 - T[477-497] 3.1E-52 |
| Pfam |
Glyco_hydro_47 (IPR001382) - T[66-490] 1.1E-110 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EDEM3_HUMAN | 44.037 % | 343 | 4.96E-108 |
| EDEM2_HUMAN | 41.758 % | 326 | 2.49E-105 |
| EDEM1_HUMAN | 67.841 % | 642 | 0 |