- Clone 'AJ493967' >
- Clone 'cima8106886' >
- Transcript 'Phmamm.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S53.g01964.02.t
Possible name(s)
MTF2; PHF1; PHF19
Gene model
Location
S53 [170,483 / 178,112]
Amino acid sequence
Length: 729
>Phmamm.CG.MTP2014.S53.g01964.02.p
DCSKNYKKIFSMVRSKAGGLTPSKAQPIFENHVSQNNRPNGKLSVFQSGSYTKFGATVNT
KDLGNFFKTSSGPEIRKSRNDIQHLFQDHSIKHLKNKSLSPLKHTNGLSNNSCFSSPNTN
KIKSPESSPLKDKTGQSYYHISRMKVQPALYRKMFGIFKEESDVLARWSDGLYYLGTVYK
VDDLKHQCHVQFEDKSISAVHFKDMQLLNNGKSDDDDDDGEDSAKVISEELDSDVTCTLC
RDGKSDPPNEIVLCDKCGQGYHQQCHAPSIDTSVLHEEDVPWQCRTCVFAAVAKRGGAES
EGPAAAALKVMKQVLPYDISSLSWCKGHKVNTEEVYCYCGGPGDWYLKMLQCCRCQQWFH
EACIQCLKTAILYGDRFYIFVCALCNEGEEYVHRLPMRWVDVVHLVLYNVTIAKTLKYYD
FYGAIMPFFAQNWESLQLGDLVHEASTRSQLKDRVIETLQNNRTRFQCGSETKKAKMSWG
LRTRSPPVPPSVSVPSCGLINDELLASMDLRHGSVLLSDSPTPLKRSAPGDQGSPTPKKK
KESIEGEWTSKNLLDNFHDTSNDNIFDRFSFGSRRSSVKSSETSTSVEEMPKRRRGRPRK
DQVVPPKPNGTRGRGRPSSGGVKLKRRKRQSSFSSEASSNIPVVDLLRESSSNGEVDPFA
SARDSNDKDLRRTMARYFGAEGRIACGERYRVLAKRVVNEPGGKSPRVEYLIEWEGFTAR
QLHESTHSR
Nucleotide sequence
Length: 2,454
>Phmamm.CG.MTP2014.S53.g01964.02.t
GATTGTAGTAAAAATTACAAAAAAATATTCAGTATGGTCAGAAGTAAAGCTGGAGGCCTG
ACCCCAAGCAAAGCTCAGCCCATATTCGAAAATCATGTGTCACAGAACAACAGGCCTAAT
GGAAAATTATCAGTGTTTCAATCTGGAAGTTATACCAAATTCGGCGCAACTGTAAATACA
AAAGACTTGGGGAACTTCTTTAAAACCAGTTCCGGGCCTGAAATTAGAAAATCGAGAAAT
GACATTCAGCACCTGTTTCAGGATCACTCCATTAAACATTTAAAGAACAAAAGCCTTTCA
CCACTCAAACACACCAATGGCTTGTCAAATAACTCTTGCTTCAGTTCACCGAATACGAAT
AAGATAAAAAGTCCTGAGTCAAGCCCCTTAAAGGATAAGACTGGTCAAAGCTACTACCAC
ATTTCAAGAATGAAAGTTCAGCCAGCTTTGTATCGAAAAATGTTTGGCATTTTTAAAGAA
GAAAGTGATGTCTTGGCTCGCTGGTCTGATGGCCTTTACTACTTAGGGACAGTATATAAG
GTTGATGATCTCAAGCATCAGTGTCATGTTCAGTTTGAAGACAAGTCAATATCTGCTGTC
CACTTCAAAGACATGCAGTTGCTGAACAATGGCAAAAGTGATGATGATGATGATGATGGT
GAAGACAGTGCAAAAGTTATTTCTGAAGAGTTGGACTCTGATGTAACTTGTACCTTATGT
CGCGATGGAAAATCGGATCCACCAAATGAAATAGTGTTGTGTGATAAGTGTGGACAAGGA
TATCATCAGCAATGTCATGCTCCTTCCATTGATACCTCAGTGCTACATGAGGAGGATGTA
CCCTGGCAATGTAGAACTTGTGTATTTGCTGCTGTTGCCAAAAGGGGTGGTGCTGAATCT
GAAGGGCCAGCAGCCGCTGCACTAAAAGTCATGAAACAAGTCCTTCCATATGATATTTCT
TCACTGTCTTGGTGTAAAGGACATAAAGTCAATACTGAAGAGGTTTATTGTTATTGTGGT
GGCCCTGGCGATTGGTATTTAAAAATGCTACAATGTTGTCGATGTCAACAGTGGTTCCAT
GAAGCTTGTATCCAATGTTTGAAAACCGCTATACTCTACGGAGATCGTTTTTATATCTTT
GTGTGTGCCTTGTGCAATGAAGGAGAGGAGTATGTGCATAGATTGCCCATGAGGTGGGTG
GATGTTGTCCATCTTGTCTTGTACAATGTCACGATTGCCAAAACCTTAAAATACTATGAT
TTCTATGGGGCAATAATGCCATTCTTTGCACAGAACTGGGAGTCACTGCAACTTGGAGAT
CTTGTTCATGAAGCATCTACGAGAAGCCAGTTGAAAGACAGGGTTATAGAAACACTTCAA
AATAATAGAACCAGATTTCAATGTGGGAGCGAAACAAAAAAGGCAAAGATGAGTTGGGGC
CTACGTACCCGTTCGCCCCCCGTTCCCCCATCAGTGAGTGTACCCAGCTGCGGGTTAATC
AATGACGAGTTGCTGGCGTCAATGGATCTACGTCATGGCTCAGTTTTATTAAGTGATTCT
CCTACTCCCCTTAAACGCAGCGCCCCGGGTGATCAGGGATCGCCAACACCGAAGAAAAAG
AAAGAATCAATCGAGGGCGAGTGGACGTCAAAAAACTTGTTGGACAACTTCCACGACACT
TCTAATGACAATATATTTGACAGATTTTCGTTTGGATCCCGTCGGAGCTCCGTCAAATCT
TCCGAAACTTCCACTAGCGTTGAAGAAATGCCAAAGCGTCGGAGAGGACGACCCCGCAAA
GACCAGGTTGTTCCTCCAAAACCGAATGGAACTCGGGGACGTGGAAGGCCATCTAGTGGT
GGAGTGAAACTGAAACGACGTAAACGCCAGTCTTCGTTCAGCAGTGAAGCTTCAAGCAAT
ATTCCAGTGGTTGACCTTTTGCGAGAATCCTCGTCGAATGGAGAAGTTGATCCATTTGCT
TCAGCGCGGGATTCAAACGACAAAGATCTACGCCGTACGATGGCGCGCTATTTCGGAGCG
GAAGGCCGCATTGCTTGTGGCGAACGATATCGGGTTTTAGCCAAGCGAGTTGTGAACGAA
CCCGGGGGTAAGTCCCCACGGGTGGAGTACCTTATCGAGTGGGAAGGATTCACTGCTCGC
CAACTTCACGAGTCCACTCACTCACGTTGATGCAGATTCGACCCTATATTGTTGTGCAAA
ATAGCGCCGGTGTTTGAAAGTTTGTTGCCTCATTTGCCCTATGGTATAAGTCTGCCTTGA
TTTTTGAATTCTGGATCAAGTACGCCAATATTTGGGTTGGGGTTGGGCCCCTTCCTTGAT
ATAATTCGATTATATGCTGCTTACATATTTTGCCACCTCGTCCAATATTGTTTATGTTTG
TAGACAATGCGCAAGTTTCTTCACAGAGCCAATTCCTTGTTGCTTACCATCAGT
| SMART |
Tudor (IPR002999) - T[156-213] 8.8E-8 |
| SUPERFAMILY |
Znf_FYVE_PHD (IPR011011) - T[226-291] 4.87E-15 - T[327-402] 1.22E-11 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[230-290] 3.5E-16 |
| ProSiteProfiles |
Znf_PHD-finger (IPR019787) - T[234-290] 9.979 |
| SMART |
Znf_PHD (IPR001965) - T[236-288] 6.4E-10 - T[336-386] 0.014 |
| Pfam |
Znf_PHD-finger (IPR019787) - T[237-288] 3.2E-11 |
| ProSitePatterns |
Zinc_finger_PHD-type_CS (IPR019786) - T[237-287] . - T[337-385] . |
| Pfam |
Mtf2_C_dom (IPR025894) - T[668-718] 2.0E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MTF2_HUMAN | 50 % | 377 | 5.44E-122 |
| PHF19_HUMAN | 43.216 % | 324 | 8.04E-102 |
| PHF1_HUMAN | 46.341 % | 299 | 1.77E-92 |