Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S5471.g18799.02.t

Possible name(s)

TRIM54; TRIM55; TRIM63

Gene model

Phmamm.CG.MTP2014.S5471.g18799

Location

S5471 [1,897 / 4,207]

Sequences

Amino acid sequence

Length: 131

>Phmamm.CG.MTP2014.S5471.g18799.02.p
MEKLMWCETCDTNLCPLCALDDKHKDHKIAPIAVLKKFKAVRRRLQGTTDVLSGKIEKIG
SNILQTEGVVTEMEDQGVKLKEKVDKECDAMIGQIEKRRQAMYADIDGIVERKKGKRQKE
IKGLRVEFNEC

Nucleotide sequence

Length: 396

>Phmamm.CG.MTP2014.S5471.g18799.02.t
ATGGAGAAACTCATGTGGTGTGAAACATGCGACACCAATCTCTGCCCGCTTTGCGCATTG
GACGACAAACACAAGGATCATAAGATTGCTCCTATCGCAGTTTTGAAGAAGTTTAAGGCT
GTAAGGCGACGACTGCAAGGAACAACCGACGTGTTATCCGGAAAAATAGAGAAAATTGGC
AGCAATATTCTGCAAACGGAAGGAGTTGTTACAGAAATGGAAGACCAAGGAGTAAAGTTG
AAAGAAAAGGTTGATAAGGAGTGCGATGCCATGATTGGTCAAATCGAGAAGAGGCGACAG
GCCATGTATGCTGATATCGACGGCATTGTTGAACGGAAAAAGGGAAAACGACAAAAGGAA
ATCAAGGGCCTCAGAGTGGAGTTTAACGAGTGTTAA

InterProScan

ProSiteProfiles	Znf_B-box (IPR000315) - T[1-32] 9.513
Pfam	Znf_B-box (IPR000315) - T[6-32] 2.5E-6
CDD	Znf_B-box (IPR000315) - T[7-32] 6.50187E-5

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value