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  1. Transcript 'Phmamm.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S5488.g18802.01.t

Possible name(s)

Phmamm.CG.MTP2014.S5488.g18802

Gene model

Phmamm.CG.MTP2014.S5488.g18802

Location

S5488 [278 / 3,490]

Sequences

Amino acid sequence

Length: 956

>Phmamm.CG.MTP2014.S5488.g18802.01.p
MLSESVLAEKLKNEQCLSNGVEINPKESAKTLHQLGLVYKEKSPDKISLIQSVALMTSAV
LRQPDNVEAIEQDLNDVCMDILASAKASKLDTSFTDNAVAEAKQKIALLRKTTKSMLNKL
KPISDDLKGIERNREMQIRVADVRKIQDYVTETYTSIMQLIANHTLSILGEAPCKFALVG
MGSLAKKEVTPYSDFESIIVLEDKIKINPNYQNILEYFQWFSTVFQVILVRLGETLLKFL
AIPCLNNPLNKKEDWFYDAYTPCGIRPDGFAPQASKNPLGRQTKTQKKPWTTELIKPISE
MVKYLDSEVDLKNGYHLADMLSRSSYVFGDLKVFEEFRTEAKQKAANLPIFNLQKQQQVQ
SDYDLYSIMLTNNIFTLDIKRFVYRSCSLFVEAFGYLYHSKLLNCFDIIDDLKTHNVVSK
ALVEKLLFSLAVAYETRVRLYSNASSQHDILHQSNYSGMPSCIQNISSFIGTKAFVEGLH
IAMTLQNYVIICFQNFQIFDHAYISSLPICKVKLAARLKLCGLAERLVNEFKDEPEHKNL
PCQIQLLTFYVRSLIGLEKYRQCIKVIKLNLPKLQQLGLIDTKCELMRQCALCLIELKKF
KRALKYFRKLNFYQFFKVSSSIPKHKISMGMGDCFKKLGRNKKALKYIKFVYDKVKDDLQ
TDNNLEDYLQIMMDYTVCLVRLGQFKEARVVCQDLIETRQTIHVNEETDVTLNFAYCLMG
GILYGLERYKEALVYLDKSWRCNEIRNDFLIKTSINHVFNKSKCLTNLGRSTEVIELIPQ
YFFDHRSTTSLVEKRGLLQLLSKAFEQSGFYEASIMCNNTLGYGEAANQELMEKINNYSE
QRLNENEKKEIRSDFKVELMHLIRKANGLFDKRRLDEAVIYYKRAIVIFSKMETDTFVLM
DAEYNSMSYRAYAHCEKQMEIEPTLPYDCTPSIFYDAPYRYNMELGSMHGNYTVAY

Nucleotide sequence

Length: 2,871

>Phmamm.CG.MTP2014.S5488.g18802.01.t
ATGCTTTCTGAGAGTGTTTTGGCAGAAAAGTTAAAAAATGAACAATGTTTATCCAATGGA
GTGGAAATTAATCCAAAGGAATCAGCAAAAACTTTGCATCAGTTGGGGCTTGTGTACAAA
GAGAAAAGTCCAGATAAGATCAGTCTCATTCAAAGTGTTGCTTTAATGACATCAGCTGTG
TTGCGGCAGCCAGACAATGTTGAAGCAATTGAACAAGACCTTAATGATGTATGCATGGAT
ATATTAGCTTCAGCCAAGGCTTCAAAGTTAGATACTTCATTTACTGACAATGCAGTTGCT
GAAGCGAAGCAGAAAATTGCATTGCTTCGTAAAACAACCAAAAGCATGCTAAACAAATTG
AAACCAATCAGTGATGATTTAAAAGGTATCGAAAGAAACAGGGAAATGCAAATCAGAGTT
GCAGATGTAAGGAAAATACAGGATTATGTTACAGAAACTTACACAAGCATTATGCAACTT
ATAGCAAATCATACACTCTCCATCTTAGGAGAAGCTCCATGTAAGTTTGCTCTGGTAGGA
ATGGGTTCATTGGCTAAAAAAGAAGTGACCCCATATTCTGATTTTGAAAGCATTATTGTG
TTAGAAGACAAAATTAAGATAAATCCTAACTACCAAAACATCTTGGAGTATTTTCAGTGG
TTTTCAACTGTTTTTCAAGTTATACTGGTTCGTCTGGGGGAAACGTTACTCAAATTCTTG
GCTATTCCATGTCTTAACAATCCATTAAACAAAAAAGAAGATTGGTTTTATGATGCATAC
ACCCCATGTGGAATCCGTCCTGATGGATTTGCTCCTCAAGCAAGTAAAAATCCATTGGGA
AGACAAACAAAGACACAGAAGAAGCCGTGGACAACTGAGCTGATCAAACCAATCAGTGAG
ATGGTAAAGTACTTGGACAGTGAAGTGGATTTGAAAAATGGATATCATTTGGCAGACATG
TTAAGCAGATCGAGTTATGTTTTTGGAGACTTAAAAGTTTTTGAAGAGTTTAGAACTGAA
GCCAAACAAAAAGCTGCTAATCTGCCGATTTTTAATTTGCAGAAACAACAGCAAGTTCAA
AGTGACTATGATCTCTACTCAATAATGTTGACCAACAATATTTTCACCCTAGACATCAAA
CGATTTGTTTACAGAAGTTGTTCTTTGTTTGTGGAGGCCTTTGGGTACTTGTACCACAGC
AAGCTATTAAACTGTTTTGATATTATTGATGACTTAAAGACACATAATGTTGTAAGCAAG
GCACTAGTTGAAAAACTTCTGTTTTCGTTGGCAGTTGCATATGAAACAAGAGTAAGGCTG
TACAGCAACGCATCAAGTCAACATGATATTCTCCATCAAAGTAATTATAGTGGAATGCCA
TCATGTATACAAAATATTTCATCCTTCATAGGCACTAAGGCATTTGTGGAAGGTCTACAT
ATTGCAATGACCCTACAAAACTACGTTATCATTTGTTTTCAAAACTTTCAAATATTTGAT
CACGCATATATTTCATCATTACCAATATGTAAAGTAAAGCTCGCAGCACGGTTAAAACTA
TGTGGGCTAGCTGAAAGGCTAGTAAATGAATTTAAAGATGAACCAGAACATAAGAATTTG
CCTTGTCAAATCCAACTGCTTACTTTTTACGTAAGAAGTTTGATTGGTCTGGAGAAATAC
AGACAGTGCATCAAAGTAATAAAATTAAATTTACCAAAATTGCAACAGCTTGGTCTTATT
GATACCAAATGTGAACTTATGAGGCAATGTGCCCTTTGCTTGATTGAATTGAAGAAGTTT
AAAAGAGCCCTAAAATACTTCAGAAAACTGAACTTTTATCAGTTTTTTAAAGTTTCAAGC
TCCATTCCTAAGCATAAAATTAGTATGGGAATGGGTGATTGCTTCAAAAAGCTTGGCAGA
AACAAAAAAGCTCTAAAATACATAAAATTTGTTTATGATAAAGTAAAAGATGACCTACAA
ACTGACAATAATCTTGAAGATTATCTTCAAATCATGATGGACTATACAGTATGCCTTGTA
AGGTTGGGTCAATTCAAAGAAGCAAGAGTTGTTTGTCAGGATCTCATTGAAACAAGACAA
ACCATCCATGTCAATGAGGAAACAGATGTCACATTGAATTTTGCATACTGTTTAATGGGA
GGTATATTGTATGGTCTGGAGAGATACAAAGAAGCTCTTGTTTATCTTGATAAGTCATGG
AGGTGCAATGAGATCAGAAATGACTTTCTTATTAAAACAAGTATCAATCATGTGTTTAAT
AAATCCAAGTGTCTGACAAACTTGGGAAGGTCAACTGAAGTGATTGAGTTGATTCCACAG
TACTTTTTTGATCACAGATCTACAACTTCATTGGTAGAAAAACGCGGTTTGCTGCAACTA
CTATCGAAGGCATTTGAACAATCAGGGTTTTATGAAGCCAGTATCATGTGCAACAATACC
CTGGGCTATGGTGAAGCAGCTAATCAAGAACTTATGGAGAAAATCAACAATTACAGTGAA
CAAAGATTAAACGAGAATGAAAAAAAGGAAATCCGTTCAGATTTTAAAGTTGAACTAATG
CATCTGATCAGAAAGGCCAATGGTTTGTTTGATAAAAGAAGATTGGATGAAGCTGTAATT
TATTACAAAAGAGCTATAGTTATTTTTTCAAAAATGGAGACAGACACATTTGTGCTCATG
GATGCTGAATACAACAGTATGAGTTATCGTGCCTATGCACATTGTGAAAAACAAATGGAA
ATTGAACCAACTTTACCGTATGATTGTACACCATCTATATTCTATGATGCACCTTACAGA
TACAACATGGAATTGGGTAGTATGCATGGCAACTACACTGTGGCATACTGA

InterProScan

Pfam
GlnD_Uridyltrans_N (IPR005105) - T[136-233] 1.4E-7
Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[524-927] 1.3E-15
SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[557-741] 2.11E-12
SMART
TPR_repeat (IPR019734) - T[625-658] 79.0 - T[713-746] 93.0 - T[859-892] 9.8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value