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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S5...' > 
  2. Clone 'AHC0AAA234YK23' > 
  3. Clone 'cien196549' > 
  4. EST 'AHC0AAA231YP10_RM1' > 
  5. Transcript 'Phmamm.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S549.g09963.01.t

Possible name(s)

LCAT; PLA2G15

Gene model

Phmamm.CG.MTP2014.S549.g09963

Location

S549 [90,380 / 93,980]

Sequences

Amino acid sequence

Length: 468

>Phmamm.CG.MTP2014.S549.g09963.01.p
MILDSQRLRNLVEETYSTNGNKKVAIISHSLGGLYATWFLNHQSQAWKDQFVDTYISIAT
PWAGSSDVLLALISGYNFGISFVKPLTARRQQRCFETNFLLLPRANFPPPDNVILSTDER
GYNCTDEDMRAVLTRAGVPNGAELFQYTEDILKYEGRNFPDQQPQFINNDGDGTVAHRSL
SACKLWNLAPGLIKRGYKRDISVRGAPYDFRLAMSSNSEYFTRLRNLVEETYSTNGNKKV
AIISHSLGGLYATWFLNHQSQAWKDQFVDTYISIATPWAGSSDVLLALISGYNFGISFVK
PLTARRQQRCFETNFLLLPRANFPPPDNVILSTDERGYNCTDEDMRAVLTRAGVPNGAEL
FQYVRDANKVPGGPNGLPPHPGVDTFCVYGIGVQTEDILKYEGRNFPDQQPQFINNDGDG
TVAHRSLSACKLWNLAPGGGIVELPGVSHTEALKGKTGIDEIMNILFR

Nucleotide sequence

Length: 1,407

>Phmamm.CG.MTP2014.S549.g09963.01.t
ATGATTCTTGATTCCCAAAGATTACGAAATCTGGTTGAGGAAACATACAGCACGAATGGA
AACAAAAAAGTTGCTATTATATCCCATAGCCTTGGTGGTCTCTATGCCACGTGGTTCCTC
AACCACCAATCACAAGCCTGGAAGGACCAATTCGTCGACACATACATTTCCATTGCCACC
CCGTGGGCTGGAAGTAGTGACGTGCTACTTGCTCTTATATCCGGTTACAATTTTGGTATT
TCCTTCGTGAAGCCTTTGACCGCCCGAAGACAGCAACGATGCTTCGAAACAAATTTTCTG
CTTCTTCCTCGTGCCAATTTTCCACCACCTGATAACGTTATTCTATCAACGGATGAGCGC
GGTTACAACTGCACGGACGAAGACATGAGAGCAGTGTTAACACGTGCTGGTGTTCCCAAT
GGCGCTGAGTTGTTCCAGTACACAGAAGATATTCTTAAGTACGAAGGTAGAAATTTTCCT
GATCAGCAGCCTCAATTTATCAACAACGATGGAGATGGCACAGTAGCACACCGAAGCTTA
TCAGCATGCAAGTTGTGGAATCTTGCACCAGGTCTTATAAAACGTGGATATAAGAGAGAC
ATCTCCGTTCGAGGAGCACCTTATGATTTTAGGCTTGCCATGTCCTCAAATTCTGAATAT
TTTACAAGATTACGAAATCTGGTTGAGGAAACATACAGCACGAATGGAAACAAAAAAGTT
GCTATTATATCCCATAGCCTTGGTGGTCTCTATGCCACGTGGTTCCTCAACCACCAATCA
CAAGCCTGGAAGGACCAATTCGTCGACACATACATTTCCATTGCCACCCCGTGGGCTGGA
AGTAGTGACGTGCTACTTGCTCTTATATCCGGTTACAATTTTGGTATTTCCTTCGTGAAG
CCTTTGACCGCCCGAAGACAGCAACGATGCTTCGAAACAAATTTTCTGCTTCTTCCTCGT
GCCAATTTTCCACCACCTGATAACGTTATTCTATCAACGGATGAGCGCGGTTACAACTGC
ACGGACGAAGACATGAGAGCAGTGTTAACACGTGCTGGTGTTCCCAATGGCGCTGAGTTG
TTCCAGTACGTACGTGATGCCAATAAAGTCCCTGGGGGGCCGAACGGTCTACCACCACAT
CCAGGGGTCGATACTTTTTGTGTTTACGGCATTGGGGTTCAGACAGAAGATATTCTTAAG
TACGAAGGTAGAAATTTTCCTGATCAGCAGCCTCAATTTATCAACAACGATGGAGATGGC
ACAGTAGCACACCGAAGCTTATCAGCATGCAAGTTGTGGAATCTTGCACCAGGTGGTGGC
ATAGTTGAGTTGCCTGGTGTTAGCCACACAGAGGCACTGAAAGGCAAAACTGGAATTGAC
GAGATTATGAACATTTTGTTTCGATAA

InterProScan

Pfam
LACT/PDAT_acylTrfase (IPR003386) - T[6-106] 4.0E-25 - T[192-321] 1.2E-36 - T[375-447] 1.4E-7
SUPERFAMILY
AB_hydrolase (IPR029058) - T[9-182] 4.32E-12 - T[187-450] 1.29E-19

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PAG15_HUMAN 34.982 % 162 4.1E-45
LCAT_HUMAN 35.64 % 156 7.42E-43