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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R27....'
  2. EST 'AHC0AAA223YI05_RM1'
  3. Clone 'AHC0AAA180YP13'
  4. Transcript 'Phmamm.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S54.g02001.01.t

Possible name(s)

MRPL44

Location

S54 [244,888 / 246,273]

Sequences

Amino acid sequence

Length: 339

>Phmamm.CG.MTP2014.S54.g02001.01.p
MRRMIRLQFPLCKQMLASPTQGTRKYTSKPGNPQLEPVNKNSIMFARWKKHWYLSMARKK
NIEGEEPEQPRSTRENWNYEAEFAAFKLRLQIDVADDDLRAAFTQPLPERDDVVDYSSLC
TKGNILIHEFVKHYINLSFPKLCDEGKSTILDYLCSTKQLAHIAFNLGYKDFIQCSPFPP
SSEVFAESFQASIEAIAKGSGGPVAAGKFILDFIIPQLIGKDILHDIWKPQNPMKILTQE
LQNQGKPGPEARLVRQSGISSTLPVFFIALFSGKEFLTEGAGESIELAETDAAKLVLKRI
YGVEPNSRAIMMGVVVDDEFLEKLFAPLMQQRQQITGSG

Nucleotide sequence

Length: 1,020

>Phmamm.CG.MTP2014.S54.g02001.01.t
ATGCGGCGAATGATAAGGCTGCAATTTCCATTGTGTAAGCAAATGCTTGCTTCTCCTACC
CAAGGTACACGAAAATACACATCCAAACCAGGCAATCCTCAACTTGAACCAGTTAACAAA
AATTCAATCATGTTTGCAAGATGGAAAAAACATTGGTATTTGTCCATGGCTCGTAAAAAA
AACATAGAAGGAGAGGAACCAGAACAACCAAGGTCTACGAGAGAAAATTGGAATTATGAA
GCAGAGTTTGCTGCATTTAAGTTGCGCCTTCAAATAGATGTTGCTGATGATGATCTTCGA
GCAGCATTCACTCAGCCACTTCCTGAAAGAGATGATGTTGTTGATTACAGTAGTCTGTGT
ACAAAAGGCAATATCTTAATCCATGAATTTGTAAAGCACTACATTAACTTATCCTTCCCC
AAACTGTGTGATGAGGGAAAATCCACGATCCTAGACTATCTGTGCAGTACCAAACAGTTG
GCCCACATTGCTTTCAACTTGGGTTACAAAGACTTTATACAATGTAGTCCCTTTCCTCCT
TCAAGTGAAGTATTTGCTGAATCATTTCAAGCAAGCATTGAAGCAATTGCCAAGGGTAGC
GGTGGGCCAGTTGCTGCTGGAAAGTTTATATTGGACTTCATTATACCACAACTGATAGGA
AAGGACATTTTGCATGACATATGGAAACCACAGAACCCAATGAAGATTTTGACCCAAGAG
TTGCAGAATCAAGGCAAACCAGGACCTGAAGCTAGGCTTGTTCGCCAATCTGGCATAAGC
TCAACATTGCCTGTATTTTTCATTGCTTTGTTTTCTGGAAAAGAGTTTTTGACTGAAGGC
GCTGGTGAGAGTATAGAGCTAGCTGAAACAGATGCTGCCAAATTAGTGCTGAAACGAATT
TATGGGGTTGAGCCCAATTCCAGGGCAATTATGATGGGTGTAGTTGTTGATGATGAGTTC
TTGGAAAAACTTTTTGCACCCCTAATGCAACAAAGACAGCAGATAACTGGTTCAGGTTAA

InterProScan

Gene3D
RNase_III_sf (IPR036389) - T[54-177] 2.4E-6
SUPERFAMILY
RNase_III_sf (IPR036389) - T[81-220] 4.45E-7
CDD
dsRBD_dom (IPR014720) - T[232-300] 6.43712E-5
ProSiteProfiles
dsRBD_dom (IPR014720) - T[232-302] 11.067

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RM44_HUMAN 30.492 % 145 5.13E-41