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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S562.g10081.01.t

Possible name(s)

CD209; CLEC4E; CLEC4M

Gene model

Phmamm.CG.MTP2014.S562.g10081

Location

S562 [6,034 / 8,321]

Sequences

Amino acid sequence

Length: 129

>Phmamm.CG.MTP2014.S562.g10081.01.p
MESRQIDHMIMTKKRNWTNSRKYCQSIGGDLSTWGMRNATVRNSIIENVLRPAPPSSYWI
GLSDLDQEGVWKYVDGIAVTTNNTDFSTGQPDNWGSVQDCGWLYLDYNFQMDDSWCAGNA
LAICERILN

Nucleotide sequence

Length: 390

>Phmamm.CG.MTP2014.S562.g10081.01.t
ATGGAAAGCAGACAGATTGACCACATGATTATGACCAAAAAGAGAAATTGGACAAACTCG
AGAAAATATTGCCAGTCAATTGGTGGAGATTTGTCGACCTGGGGAATGAGAAACGCAACT
GTTCGCAACTCGATTATTGAAAATGTGCTACGTCCCGCTCCACCATCAAGTTACTGGATT
GGCTTGTCTGACCTCGACCAAGAAGGAGTTTGGAAATATGTTGATGGCATTGCCGTAACA
ACCAACAATACCGACTTTTCAACCGGCCAACCTGACAACTGGGGTTCAGTACAAGATTGT
GGATGGTTGTATCTGGATTATAACTTCCAGATGGACGACAGTTGGTGTGCAGGAAATGCA
CTCGCCATCTGTGAGAGAATCTTGAACTAG

InterProScan

Gene3D
C-type_lectin-like/link_sf (IPR016186) - T[4-128] 1.2E-22
ProSiteProfiles
C-type_lectin-like (IPR001304) - T[8-125] 14.272
SUPERFAMILY
CTDL_fold (IPR016187) - T[10-127] 2.27E-22
Pfam
C-type_lectin-like (IPR001304) - T[14-126] 8.4E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value