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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S2...' > 
  2. Transcript 'Cisavi.CG.ENS81.R0.1...' > 
  3. Clone 'ma141m07' > 
  4. Transcript 'Haaura.CG.MTP2014.S2...' > 
  5. Transcript 'Phmamm.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S562.g10084.02.t

Possible name(s)

Phmamm.CG.MTP2014.S562.g10084

Gene model

Phmamm.CG.MTP2014.S562.g10084

Location

S562 [33,778 / 48,265]

Sequences

Amino acid sequence

Length: 1,501

>Phmamm.CG.MTP2014.S562.g10084.02.p
MSHSGRDHELPGAYKRSNAGRNDSRSLPRSSFPPKPSRYTSSSFATSDDFGPSHFNFDDS
DTSGSRSRNVSTLPSSAYPRHTSGSSFTSSQDPPPIPDGKRRTISMGANHHPPGRQKSRE
RRRTMDARKHAPPFTISDSTRRTTSGSDDQHRLGSDGSSVYSSADSFDSQDDFDGRFPPR
PPKPEKYLKRDTSSSNFTGQFYPDPLESADMSRLQSGYSEDTNTTLTNGDRRPTDIDELA
EYFNKKLEDVQRQADHAINEIQDGQRNRSFTDDSSMYSYNRGPPGGGTFARQGREPSTRT
IRPSNRAGAGISSDASTITPTNSRSFRPIVVTQDDQQSDNISAVRDELDSLKFQLSKGLE
NLENRGGSSQNMEEMADYFSKRLEECQKQVYSAVNQAQNQPGETKQRFEGQPPSGRNRRS
QDWGPAEEEFYDSSDSGIGPRNLTIRPMTRAHAEAQNNASVMPSAPPPVNRRQRHHEPER
HDYPHPPPPMDDEESFARMESMIPEKHHQAPPPIYRDDIPGGKMMDEDLLGSDDEEYWDD
FEEFIDDDTPAPETSIPVPKITFKRHNYIYQVLYVVYILSFLAYVYVRIQFTLDAPGLNR
IYCIVVAILEIITAPSLILQGLCLWRWISRDPAPSDAFENPKFHTARIMVPTYKEPLEVV
AGTVHEIIHMDLPPNFHVHVYVLDDGKREILENWVLSKRTKRRVYLHYVARPKLPGVPHH
AKAGNINHTLHYIFDDAYPEQECVIIFDADFMPRRNYLRRVLPVFSEKRTRPLALVQTPQ
FFYNVNPEEDVWDHLNVSFFHRIEPSLDRWSAVNCCGTNFVVRADALKDVGYFPVGCLTE
DTLLSLRLCTMGWGVAYHHEVLAIGQSPHEITEIFKQRSRWCKGNLQIFLDEFPLMQSGL
SLSQRIFYSSCGFNYFCASISIPFFQLVPAWAIFFGLWPVSEIGLEFAFAFFIYYLLGNM
LLLFPPPGFGIRDMWNGELASTNLWFTYFNGVRRIVGTKLLKGKGELTFKTTKKKTDEDE
EGSNVGFQKEDVRACYMHFIMFFIMLITIIYAIVQASIAQNVQFYFYYMYMIGMSWALIN
MTPYLIVVIYCWYRVRIPGLLVACFRNVQLMLRLVCAALIMVQAFTTRNLTENFTCPHEY
TGVLGGSPLAMVKTTDALSKLQVARNSFWLLGLDDDFYTMQQIKRTACEEDEVPIIVFFM
HPSQGLALDSEAGHYMPEHRIDTWEDYDEKMSKYADHLSDIPSLIVMEPSLLMHTFNSKT
EYHNTDYQRVGNVVKMFPYSWVYVDAGNAMYLQWQVNLDHIIGVMKNMPPAIRGFSINVG
SFVNSTFNQQLAEEIHCQTGYHYIIDTSRNGGTFSDRSLEEINQCTYDPPNAINGTTTLR
RKRWVLNQANTGNEPVLGEGPAAGAVYTSDTEYVAETANTGTDYYDAYSDTASTLCISLA
KVGLDAYAWVKTPGESDGRMFPAGTYHPCLMNHFSECSETCPQYVPKISGEFQRAESCSC
S

Nucleotide sequence

Length: 4,506

>Phmamm.CG.MTP2014.S562.g10084.02.t
ATGAGTCACTCAGGAAGAGATCACGAGCTTCCTGGAGCTTACAAGCGTTCCAATGCGGGA
CGAAACGACAGCAGAAGTCTACCACGCAGTTCTTTTCCACCAAAACCATCACGATACACC
AGTTCATCATTTGCGACATCTGATGACTTCGGTCCCAGCCATTTTAATTTTGATGATAGC
GATACATCGGGAAGCCGATCGCGAAACGTCAGCACGTTGCCAAGCTCCGCCTATCCACGT
CACACGTCTGGATCTTCATTCACAAGTAGCCAGGATCCTCCTCCCATCCCGGATGGAAAG
AGGAGAACCATCTCCATGGGAGCCAATCACCATCCGCCTGGTAGACAAAAGTCACGTGAG
AGGAGACGAACCATGGATGCAAGAAAGCATGCACCTCCGTTCACAATCAGCGATTCGACA
AGAAGGACAACATCAGGCAGCGATGACCAACACAGACTAGGATCTGACGGTTCCAGCGTT
TACAGTTCTGCTGACAGTTTCGACTCGCAGGACGATTTTGACGGGCGTTTCCCTCCCAGA
CCACCAAAACCGGAGAAATATTTGAAACGGGACACGTCATCATCTAACTTCACTGGACAA
TTCTACCCAGATCCATTGGAGAGTGCTGATATGAGCCGACTTCAATCTGGATATTCAGAG
GACACCAACACAACACTCACTAATGGTGATCGCAGACCAACCGATATTGACGAGCTTGCT
GAGTATTTCAACAAAAAACTTGAAGATGTTCAACGTCAAGCCGATCACGCTATTAATGAA
ATACAAGATGGACAACGCAATCGCTCTTTCACCGACGATTCATCGATGTACAGCTACAAT
CGTGGGCCGCCAGGTGGTGGAACTTTTGCCAGACAGGGTCGTGAACCATCAACGAGAACC
ATTCGACCCAGCAACCGTGCTGGAGCTGGAATTTCATCTGATGCCTCAACCATTACTCCA
ACCAACAGTCGATCTTTCCGTCCTATTGTTGTCACACAGGATGATCAGCAAAGCGACAAC
ATCTCAGCAGTGAGAGACGAACTGGACAGCCTAAAGTTCCAGCTCTCCAAGGGTTTGGAA
AATCTAGAAAACCGCGGCGGATCTTCACAAAACATGGAGGAAATGGCCGATTACTTCAGC
AAGAGATTGGAGGAATGTCAAAAGCAGGTGTACAGCGCTGTGAACCAAGCGCAGAATCAG
CCAGGAGAGACTAAGCAGCGATTCGAAGGGCAACCACCATCCGGACGAAATCGCAGATCT
CAGGATTGGGGTCCAGCAGAGGAAGAATTTTACGATAGCAGTGACAGTGGTATTGGACCA
AGAAACCTCACGATTAGACCAATGACGAGAGCTCACGCAGAAGCACAGAACAATGCTTCC
GTCATGCCATCAGCCCCTCCTCCAGTGAACAGAAGGCAACGTCACCACGAGCCCGAGCGC
CATGACTACCCACATCCACCTCCTCCTATGGATGATGAAGAGTCATTTGCCAGGATGGAG
AGCATGATCCCAGAGAAGCACCATCAAGCACCTCCTCCTATCTACCGGGATGACATCCCT
GGTGGGAAGATGATGGATGAAGACTTGCTAGGATCGGATGATGAGGAGTATTGGGATGAT
TTTGAAGAGTTCATCGACGATGACACACCCGCACCAGAAACATCAATTCCCGTCCCAAAA
ATTACTTTCAAGAGGCACAATTACATTTACCAAGTTCTCTATGTAGTGTACATCTTGTCT
TTCCTGGCCTACGTGTATGTGCGAATTCAATTCACACTGGACGCCCCTGGACTTAACCGA
ATTTACTGTATCGTTGTTGCTATACTGGAAATCATTACAGCCCCGTCTTTAATCCTACAG
GGTCTTTGCCTTTGGCGCTGGATATCACGTGACCCTGCCCCTTCCGATGCCTTCGAGAAC
CCCAAGTTTCATACCGCTAGAATTATGGTGCCTACTTACAAGGAACCTTTAGAAGTGGTG
GCTGGCACAGTACACGAGATTATCCACATGGACTTGCCCCCAAACTTTCACGTTCACGTT
TACGTACTGGATGACGGAAAGAGAGAAATTCTCGAAAACTGGGTTTTGTCAAAACGAACT
AAACGACGAGTTTACCTTCATTATGTTGCCCGACCCAAACTTCCTGGTGTTCCTCATCAC
GCCAAGGCTGGAAATATCAATCACACTCTGCATTACATCTTCGACGACGCTTACCCAGAA
CAGGAATGTGTGATCATCTTTGATGCCGACTTCATGCCCAGGAGAAACTATTTGCGGAGA
GTGTTGCCTGTCTTCTCGGAGAAGCGTACACGTCCGTTAGCCCTGGTACAGACTCCTCAG
TTCTTCTACAACGTCAACCCTGAAGAAGATGTATGGGACCACTTGAACGTCTCATTTTTC
CATCGTATCGAACCTAGTCTGGATCGCTGGAGTGCAGTCAACTGTTGTGGAACCAACTTT
GTGGTGCGAGCTGATGCCCTTAAAGATGTAGGCTACTTCCCCGTGGGTTGCCTCACTGAA
GACACCCTACTCTCGCTCCGTCTGTGCACTATGGGTTGGGGTGTAGCTTACCATCACGAA
GTACTCGCCATTGGTCAATCTCCCCACGAAATTACTGAGATTTTCAAGCAGCGTTCACGT
TGGTGCAAAGGCAACCTGCAGATTTTCCTGGACGAATTCCCTCTTATGCAGTCTGGTCTC
TCTCTTTCTCAACGTATCTTCTACAGTTCTTGTGGTTTCAACTACTTCTGTGCTTCCATC
TCAATTCCGTTTTTCCAGCTCGTACCAGCCTGGGCTATTTTCTTTGGTCTCTGGCCTGTA
TCAGAGATTGGTCTTGAGTTTGCGTTCGCCTTTTTCATTTATTATCTTCTCGGGAACATG
CTCTTGCTCTTCCCTCCTCCCGGATTCGGCATCAGAGACATGTGGAACGGAGAGTTGGCT
TCTACTAATCTGTGGTTCACTTACTTTAACGGAGTGAGACGTATCGTCGGAACAAAACTA
CTGAAAGGAAAAGGTGAACTGACGTTTAAGACAACCAAAAAGAAGACGGACGAAGATGAA
GAAGGATCAAATGTCGGATTTCAAAAGGAAGATGTTCGCGCTTGTTACATGCATTTCATT
ATGTTCTTTATCATGTTGATCACCATCATTTACGCTATTGTCCAAGCTAGTATCGCTCAG
AACGTACAGTTCTACTTCTACTACATGTACATGATCGGTATGTCTTGGGCTCTTATCAAC
ATGACCCCGTATCTGATTGTGGTCATCTACTGCTGGTACCGAGTTAGGATTCCTGGTTTG
TTGGTCGCTTGCTTCAGAAACGTCCAACTTATGCTGCGTCTTGTATGTGCCGCGCTTATT
ATGGTACAGGCTTTCACAACAAGGAATTTGACCGAGAATTTCACCTGTCCTCACGAGTAT
ACCGGAGTCCTAGGTGGAAGCCCGTTGGCTATGGTGAAGACCACAGATGCTTTGTCAAAA
CTTCAAGTGGCAAGAAACTCTTTCTGGCTCTTGGGTCTTGACGACGATTTCTACACAATG
CAGCAGATTAAACGTACAGCATGTGAAGAGGATGAAGTCCCCATCATTGTCTTCTTTATG
CATCCTTCACAGGGACTAGCGCTCGATTCAGAGGCTGGACATTACATGCCCGAGCACAGA
ATCGACACCTGGGAGGATTACGATGAGAAAATGAGCAAATACGCCGATCATTTGTCGGAT
ATTCCCTCATTAATTGTAATGGAACCTTCGTTACTTATGCACACCTTTAATTCAAAGACC
GAATACCACAATACAGACTATCAGAGGGTTGGCAACGTTGTGAAGATGTTTCCGTATTCT
TGGGTGTACGTGGACGCTGGGAACGCTATGTACCTACAGTGGCAAGTCAATCTGGATCAT
ATAATAGGAGTTATGAAAAACATGCCGCCTGCTATAAGAGGATTTTCCATTAATGTGGGA
TCGTTTGTAAACAGCACATTTAACCAACAGCTGGCTGAAGAAATCCATTGTCAAACTGGA
TATCATTATATTATTGACACATCCCGTAACGGAGGAACCTTTTCTGATCGATCACTGGAG
GAGATCAACCAATGTACTTACGATCCTCCAAACGCTATCAACGGCACAACAACACTGCGA
CGAAAGCGTTGGGTGTTAAACCAAGCTAACACCGGGAACGAGCCAGTACTGGGAGAAGGG
CCAGCTGCTGGTGCCGTTTACACTTCAGATACGGAATACGTGGCCGAAACAGCGAACACG
GGTACAGATTATTACGACGCGTATTCAGACACAGCAAGCACCCTTTGCATATCACTGGCT
AAAGTGGGTCTTGATGCGTACGCTTGGGTCAAAACACCTGGAGAATCCGACGGCCGCATG
TTCCCAGCTGGTACCTATCACCCTTGTCTCATGAATCACTTCTCTGAGTGCAGCGAAACC
TGCCCACAGTATGTGCCAAAGATATCAGGCGAATTTCAACGTGCGGAATCGTGTTCTTGC
TCATAA

InterProScan

Gene3D
Nucleotide-diphossugar_trans (IPR029044) - T[635-868] 3.5E-57
SUPERFAMILY
Nucleotide-diphossugar_trans (IPR029044) - T[648-939] 1.03E-33
SUPERFAMILY
Beta_cellobiohydrolase_sf (IPR036434) - T[1122-1481] 9.94E-55
Gene3D
Beta_cellobiohydrolase_sf (IPR036434) - T[1150-1378] 3.9E-19
Pfam
Beta_cellobiohydrolase (IPR016288) - T[1179-1353] 3.5E-12
PRINTS
Beta_cellobiohydrolase (IPR016288) - T[1279-1292] 4.4E-6 - T[1312-1322] 4.4E-6 - T[1444-1458] 4.4E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value