- Transcript 'Phmamm.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S56.g02039.03.t
Possible name(s)
AL121581.1; MYT1
Gene model
Location
S56 [46,544 / 53,081]
Amino acid sequence
Length: 1,245
>Phmamm.CG.MTP2014.S56.g02039.03.p
WSMDTAVAQVMGVLPNSSDVADKSNTFSYALSVNSQDNSRFSEDKSHTSGQSPQPIEKSD
AFETRSDVHTPSSDESVRSSSPEAEADCERNMEQFPAFQMQNSNRFLEMFTKLIGSRMGF
PPHAAMQQGRLNVEPSNISPPQSPPDTHQDAVMCDEARDGKDLIREEPVRSDNENNITVA
TSECSGREFADQTSSTFNPDPTGDKDASTSEARLMHTSQEINLEMLNQTRNPSSDQRMKN
MQCFRPNPQHMVSKDLISPQPTNQKREGPSDHLGFNSGNNYSKDSKCPTPGCRGEGHITG
LYSHHRSFSGCPLKDQMPKDAIQALNEGSVKCPTPGCIGKGHVNGNRQTHRSVSGCPIAA
QNKRMQQQMRADTKQPNGRKPSFSQFQKQGPLVYPFMDRDKFPASALNLPPPYGKSELRQ
ESKQTRDSLTPSRGETTQTAGNVVLNATQRFNQINASLKPRLMLPYYSPPSQQSLAQAKI
FASAMEAMRIQQQMMLRLHQPMLVDRNRTALNEVPRRNSVRVESHESECADSPKRKRSFS
PPPSPPPKTSEVTHSIESIMRRSPNVGSSPPTTPNRATDSDMAHNPVKRAKIICSPEQEA
QKRETNRLTEEVLSRFQHSAGILPFYPFFDQRRMQLPAPLVGVQEKERPSETEENFVRSD
EQSEKDDERRDSGYGDSPGHDGELLKIASRDPKPATKSVERERSETIVGDDPSSAGNGAL
DLTVKPSSRNSSPPLIPRSPVAFSTPTKQKAPNKKSPMSKMVDDAKPDRERHLKFLLQSG
FQPIHLNALKHSTPKSEPAGEKHHPSMIGFERFRPAPFSQAQFFAQSQRSYGGAMCENNS
NLHVKDLQRVHPSPHQSPSFHSLPYNGELSPNDAALDRNSQLSPAALRELVKTGASPNVP
FPLAPMRQKIPGKKKELLTCPMPGCDGSGHSTGNYTSHRSLSGCPLAPRGLVTACASEMK
CPTEGCDGSGHVTGNYTSHRSSSGCPLARKNRASQHGMSKSPGAANNLMANDDTFDINRS
ASTSQSFTGGLSQQNIEDKQHNKPHFLCQPEQKVFTTKASPRSDSYDMPSMIHKRVPFAM
ARDSYFALTNLDDRRCERNTSDPIDERVSVHNRQQSLDCPRTISEATQPLETQPNLNETD
KSSDIPTPDQTEHTDQTLDSRMELESEKSENEQDEPQESERELLGYLAGIALPHSREFPT
RENFRSYLANLRHCCQNPGNPDNQALLDAVREAVPSNFDLTKFIS
Nucleotide sequence
Length: 4,216
>Phmamm.CG.MTP2014.S56.g02039.03.t
CTGGAGCATGGATACCGCTGTGGCTCAAGTCATGGGTGTTCTGCCGAACTCAAGCGACGT
TGCGGACAAATCGAATACATTCAGCTATGCCCTATCTGTGAACAGCCAAGACAATTCGAG
GTTTTCTGAAGACAAATCTCACACCAGTGGACAATCTCCTCAACCGATAGAAAAATCGGA
CGCTTTCGAAACTCGCAGCGACGTTCATACGCCGTCTAGCGACGAAAGCGTGAGAAGCAG
TAGTCCCGAAGCTGAGGCCGATTGCGAACGTAACATGGAACAGTTTCCAGCATTTCAGAT
GCAAAATTCCAATCGCTTTTTGGAAATGTTTACGAAATTAATCGGTAGCCGAATGGGTTT
CCCCCCACACGCTGCTATGCAACAAGGCCGCCTAAATGTAGAGCCATCAAACATAAGTCC
ACCACAGTCACCGCCCGACACGCATCAAGACGCAGTCATGTGTGACGAAGCACGTGATGG
AAAAGATTTGATCCGAGAAGAACCAGTTCGAAGTGACAACGAAAACAATATTACCGTCGC
TACTTCAGAATGCAGTGGCCGCGAGTTTGCGGATCAAACCAGCTCAACTTTCAACCCCGA
CCCAACAGGTGATAAGGACGCATCGACATCAGAGGCCCGACTTATGCACACATCACAGGA
AATAAACTTGGAAATGTTGAACCAAACGAGAAACCCGTCTTCCGATCAACGCATGAAAAA
CATGCAGTGTTTTCGCCCAAACCCGCAACACATGGTTTCAAAAGATTTAATATCACCGCA
ACCGACGAATCAAAAGCGTGAAGGCCCGAGTGACCATCTCGGTTTTAATTCGGGAAACAA
CTACAGCAAAGACAGCAAGTGCCCCACCCCAGGCTGTCGAGGAGAAGGCCACATCACAGG
ACTGTATTCCCATCATCGCAGCTTCAGTGGCTGTCCGTTGAAGGATCAAATGCCCAAAGA
TGCAATTCAAGCCCTGAATGAAGGATCTGTCAAGTGCCCCACTCCTGGATGCATCGGCAA
GGGTCACGTGAATGGCAATCGGCAAACGCATCGCAGTGTTTCTGGATGCCCAATCGCGGC
CCAAAACAAGCGAATGCAACAGCAAATGCGAGCCGATACGAAACAGCCTAATGGTAGAAA
GCCCAGTTTTTCACAATTTCAAAAGCAAGGACCCTTGGTGTATCCATTCATGGACAGGGA
CAAATTTCCCGCTTCAGCTTTGAATTTGCCACCACCTTACGGAAAAAGTGAACTCCGACA
AGAGTCCAAACAAACCAGGGACAGTCTTACTCCGAGTCGAGGGGAAACCACACAAACCGC
AGGCAACGTGGTTTTAAATGCTACACAACGCTTTAACCAAATCAATGCCAGTTTGAAACC
GCGTTTGATGCTACCGTATTACAGCCCGCCCAGTCAACAGTCACTTGCACAGGCCAAGAT
ATTTGCTTCTGCGATGGAAGCCATGCGAATTCAGCAGCAGATGATGTTGCGGCTTCATCA
GCCGATGCTGGTAGATAGAAATCGCACTGCATTGAATGAAGTACCGCGACGAAACAGCGT
GAGGGTGGAATCCCACGAAAGCGAATGTGCTGATTCGCCCAAGCGAAAAAGATCGTTTTC
CCCACCACCATCTCCCCCTCCGAAGACGTCAGAAGTTACTCATAGCATCGAGTCCATCAT
GAGGCGTTCACCTAATGTGGGTAGCAGTCCACCAACCACACCGAATCGAGCTACCGATAG
CGACATGGCGCACAACCCGGTAAAACGCGCAAAAATTATATGCTCGCCGGAGCAAGAAGC
CCAAAAGCGCGAAACCAACCGCTTGACCGAAGAGGTTCTCAGCCGATTTCAGCATTCCGC
TGGAATATTGCCCTTTTACCCATTCTTCGACCAGCGCAGGATGCAGTTGCCAGCTCCTCT
AGTCGGTGTGCAAGAAAAAGAACGGCCCTCGGAGACCGAAGAGAATTTTGTTAGATCCGA
TGAGCAAAGCGAAAAGGACGACGAGAGGAGAGACTCTGGATATGGCGATAGTCCCGGACA
CGATGGTGAGCTGCTCAAAATTGCGAGTCGAGACCCAAAGCCTGCGACCAAGTCGGTTGA
GAGGGAACGAAGTGAAACCATTGTCGGTGACGACCCTTCTTCAGCTGGAAATGGGGCTCT
GGATCTCACTGTAAAACCTTCATCGCGCAATTCGTCTCCACCCTTGATTCCAAGATCACC
TGTTGCATTCTCAACACCGACAAAACAAAAAGCACCAAACAAAAAATCCCCAATGAGCAA
GATGGTAGATGATGCGAAACCAGATCGGGAACGCCATCTTAAATTTTTGTTGCAATCCGG
ATTTCAACCGATTCACCTAAATGCTTTGAAACATTCAACGCCAAAGTCAGAGCCTGCTGG
TGAAAAACATCATCCAAGCATGATTGGGTTTGAACGTTTCAGACCAGCGCCCTTTTCACA
AGCCCAATTTTTCGCACAGTCACAGAGATCATACGGGGGCGCAATGTGTGAGAACAACTC
CAATCTCCATGTCAAGGATTTGCAGAGAGTTCATCCGAGTCCACATCAGTCGCCATCTTT
TCATTCTCTACCTTACAACGGTGAACTGTCACCCAACGACGCGGCTTTGGACCGAAACAG
CCAACTCTCTCCAGCAGCACTACGCGAGCTGGTGAAGACTGGAGCCAGCCCGAACGTGCC
GTTTCCGTTGGCGCCCATGCGTCAGAAGATTCCCGGGAAAAAGAAAGAGCTGCTCACTTG
TCCAATGCCCGGATGCGACGGAAGTGGACATTCTACAGGCAATTACACGTCACACAGAAG
CTTGTCAGGATGCCCACTTGCTCCCAGAGGATTGGTCACAGCCTGCGCCTCAGAGATGAA
GTGCCCAACCGAAGGATGCGACGGTTCAGGACACGTCACAGGAAACTACACGTCTCATAG
AAGCTCGTCAGGTTGTCCCTTGGCAAGAAAAAATCGTGCTTCCCAACATGGAATGTCAAA
GTCCCCTGGAGCCGCAAACAATCTTATGGCGAACGATGATACGTTTGACATAAACAGATC
GGCCTCCACATCGCAGTCTTTCACTGGCGGGTTGTCACAACAGAATATAGAAGACAAACA
GCACAATAAACCACACTTCCTCTGTCAACCTGAGCAGAAAGTGTTTACCACGAAGGCATC
ACCGCGCAGTGACAGCTACGATATGCCGAGCATGATTCATAAGCGCGTTCCTTTTGCCAT
GGCACGCGATTCGTATTTCGCTTTAACAAACTTGGACGACAGACGCTGCGAACGAAACAC
TTCGGATCCAATTGACGAGCGCGTTAGCGTCCACAACCGACAACAATCACTCGACTGCCC
CAGAACCATTAGCGAAGCAACACAACCATTAGAGACTCAGCCCAACTTAAATGAAACTGA
CAAAAGCAGCGATATCCCAACTCCTGATCAGACAGAGCACACTGACCAGACCTTGGACAG
TCGCATGGAATTGGAAAGCGAAAAAAGCGAAAACGAGCAGGACGAACCACAAGAATCAGA
ACGTGAACTACTCGGATATCTGGCCGGGATCGCTCTGCCCCATTCCCGGGAATTCCCAAC
TCGCGAAAATTTCCGCTCCTACTTGGCCAATTTACGTCATTGCTGTCAAAACCCAGGGAA
TCCTGACAACCAAGCCCTTTTGGACGCCGTTCGCGAGGCTGTGCCGTCAAACTTTGATCT
GACCAAGTTTATTTCTTAAGCGTTCTTCACACTTCCTCTCACGCTATTAGTCGAAAGTTC
TTGTATATTATTTTTTAGCATTCCTTTGTGTTTCTTTCTTTTTCTTGTGTTTTTGCAATG
TTTCTCCCCTCTTATTGTTTAGTTCAATGGCGATGGCTTTTTCCGTGCGATTCTACCACC
TGTCGATGCTCTTCAGTTGCTATGACATTTGTCCGCTCAACTGCGCGCTATGTTACTTGC
AATCATTGCTGATGTACATATTAGATTCACTGTTAAAATCACCTACATTAAGTTATACCA
CCAGACAAACCTCTTCTGGTTTGCGTTGGTTCAATTTCGAGAGTGTGTCATGATTTACAT
GAATGTTGAAATTTCTTAAGCCCTGGTCGGCTAACTACAAAACAGCGTTGCGTTTTGTGA
GCCATGTTGTTGCCGTTTTGTGTTTGTGCTGTTATTTTGTTCACGTCATTGTGGCACACA
GGTTGTACAAAAAGAG
| ProSiteProfiles |
Znf_C2HC (IPR002515) - T[278-321] 16.644 - T[323-366] 16.42 - T[911-954] 18.191 - T[957-995] 10.839 |
| SUPERFAMILY |
Znf_C2HC_sf (IPR036060) - T[284-324] 5.75E-14 - T[330-369] 3.4E-13 - T[918-955] 4.45E-13 - T[958-996] 3.14E-14 |
| Pfam |
Znf_C2HC (IPR002515) - T[286-313] 4.1E-11 - T[331-359] 2.3E-13 - T[919-947] 1.4E-13 - T[960-988] 1.5E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MYT1L_HUMAN | 58.763 % | 128 | 7.33E-30 |
| MYT1_HUMAN | 72.84 % | 130 | 2.23E-30 |
| ST18_HUMAN | 73.75 % | 129 | 2.76E-30 |