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TRANSCRIPT CARD

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  1. Clone 'AHC0AAA230YM03' > 
  2. EST 'BW235632' > 
  3. Clone 'AHC0AAA226YF09' > 
  4. EST 'AHC0AAA231YE09_RM1' > 
  5. Transcript 'Phmamm.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S56.g02039.04.t

Possible name(s)

AL121581.1; MYT1

Gene model

Phmamm.CG.MTP2014.S56.g02039

Location

S56 [46,551 / 52,604]

Sequences

Amino acid sequence

Length: 1,243

>Phmamm.CG.MTP2014.S56.g02039.04.p
MDTAVAQVMGVLPNSSDVADKSNTFSYALSVNSQDNSRFSEDKSHTSGQSPQPIEKSDAF
ETRSDVHTPSSDESVRSSSPEAEADCERNMEQFPAFQMQNSNRFLEMFTKLIGSRMGFPP
HAAMQQGRLNVEPSNISPPQSPPDTHQDAVMCDEARDGKDLIREEPVRSDNENNITVATS
ECSGREFADQTSSTFNPDPTGDKDASTSEARLMHTSQEINLEMLNQTRNPSSDQRMKNMQ
CFRPNPQHMVSKDLISPQPTNQKREGPSDHLGFNSGNNYSKDSKCPTPGCRGEGHITGLY
SHHRSFSGCPLKDQMPKDAIQALNEGSVKCPTPGCIGKGHVNGNRQTHRSVSGCPIAAQN
KRMQQQMRADTKQPNGRKPSFSQFQKQGPLVYPFMDRDKFPASALNLPPPYGKSELRQES
KQTRDSLTPSRGETTQTAGNVVLNATQRFNQINASLKPRLMLPYYSPPSQQSLAQAKIFA
SAMEAMRIQQQMMLRLHQPMLVDRNRTALNEVPRRNSVRVESHESECADSPKRKRSFSPP
PSPPPKTSEVTHSIESIMRRSPNVGSSPPTTPNRATDSDMAHNPVKRAKIICSPEQEAQK
RETNRLTEEVLSRFQHSAGILPFYPFFDQRRMQLPAPLVGVQEKERPSETEENFVRSDEQ
SEKDDERRDSGYGDSPGHDGELLKIASRDPKPATKSVERERSETIVGDDPSSAGNGALDL
TVKPSSRNSSPPLIPRSPVAFSTPTKQKAPNKKSPMSKMVDDAKPDRERHLKFLLQSGFQ
PIHLNALKHSTPKSEPAGEKHHPSMIGFERFRPAPFSQAQFFAQSQRSYGGAMCENNSNL
HVKDLQRVHPSPHQSPSFHSLPYNGELSPNDAALDRNSQLSPAALRELVKTGASPNVPFP
LAPMRQKIPGKKKELLTCPMPGCDGSGHSTGNYTSHRSLSGCPLAPRGLVTACASEMKCP
TEGCDGSGHVTGNYTSHRSSSGCPLARKNRASQHGMSKSPGAANNLMANDDTFDINRSAS
TSQSFTGGLSQQNIEDKQHNKPHFLCQPEQKVFTTKASPRSDSYDMPSMIHKRVPFAMAR
DSYFALTNLDDRRCERNTSDPIDERVSVHNRQQSLDCPRTISEATQPLETQPNLNETDKS
SDIPTPDQTEHTDQTLDSRMELESEKSENEQDEPQESERELLGYLAGIALPHSREFPTRE
NFRSYLANLRHCCQNPGNPDNQALLDAVREAVPSNFDLTKFIS

Nucleotide sequence

Length: 3,732

>Phmamm.CG.MTP2014.S56.g02039.04.t
ATGGATACCGCTGTGGCTCAAGTCATGGGTGTTCTGCCGAACTCAAGCGACGTTGCGGAC
AAATCGAATACATTCAGCTATGCCCTATCTGTGAACAGCCAAGACAATTCGAGGTTTTCT
GAAGACAAATCTCACACCAGTGGACAATCTCCTCAACCGATAGAAAAATCGGACGCTTTC
GAAACTCGCAGCGACGTTCATACGCCGTCTAGCGACGAAAGCGTGAGAAGCAGTAGTCCC
GAAGCTGAGGCCGATTGCGAACGTAACATGGAACAGTTTCCAGCATTTCAGATGCAAAAT
TCCAATCGCTTTTTGGAAATGTTTACGAAATTAATCGGTAGCCGAATGGGTTTCCCCCCA
CACGCTGCTATGCAACAAGGCCGCCTAAATGTAGAGCCATCAAACATAAGTCCACCACAG
TCACCGCCCGACACGCATCAAGACGCAGTCATGTGTGACGAAGCACGTGATGGAAAAGAT
TTGATCCGAGAAGAACCAGTTCGAAGTGACAACGAAAACAATATTACCGTCGCTACTTCA
GAATGCAGTGGCCGCGAGTTTGCGGATCAAACCAGCTCAACTTTCAACCCCGACCCAACA
GGTGATAAGGACGCATCGACATCAGAGGCCCGACTTATGCACACATCACAGGAAATAAAC
TTGGAAATGTTGAACCAAACGAGAAACCCGTCTTCCGATCAACGCATGAAAAACATGCAG
TGTTTTCGCCCAAACCCGCAACACATGGTTTCAAAAGATTTAATATCACCGCAACCGACG
AATCAAAAGCGTGAAGGCCCGAGTGACCATCTCGGTTTTAATTCGGGAAACAACTACAGC
AAAGACAGCAAGTGCCCCACCCCAGGCTGTCGAGGAGAAGGCCACATCACAGGACTGTAT
TCCCATCATCGCAGCTTCAGTGGCTGTCCGTTGAAGGATCAAATGCCCAAAGATGCAATT
CAAGCCCTGAATGAAGGATCTGTCAAGTGCCCCACTCCTGGATGCATCGGCAAGGGTCAC
GTGAATGGCAATCGGCAAACGCATCGCAGTGTTTCTGGATGCCCAATCGCGGCCCAAAAC
AAGCGAATGCAACAGCAAATGCGAGCCGATACGAAACAGCCTAATGGTAGAAAGCCCAGT
TTTTCACAATTTCAAAAGCAAGGACCCTTGGTGTATCCATTCATGGACAGGGACAAATTT
CCCGCTTCAGCTTTGAATTTGCCACCACCTTACGGAAAAAGTGAACTCCGACAAGAGTCC
AAACAAACCAGGGACAGTCTTACTCCGAGTCGAGGGGAAACCACACAAACCGCAGGCAAC
GTGGTTTTAAATGCTACACAACGCTTTAACCAAATCAATGCCAGTTTGAAACCGCGTTTG
ATGCTACCGTATTACAGCCCGCCCAGTCAACAGTCACTTGCACAGGCCAAGATATTTGCT
TCTGCGATGGAAGCCATGCGAATTCAGCAGCAGATGATGTTGCGGCTTCATCAGCCGATG
CTGGTAGATAGAAATCGCACTGCATTGAATGAAGTACCGCGACGAAACAGCGTGAGGGTG
GAATCCCACGAAAGCGAATGTGCTGATTCGCCCAAGCGAAAAAGATCGTTTTCCCCACCA
CCATCTCCCCCTCCGAAGACGTCAGAAGTTACTCATAGCATCGAGTCCATCATGAGGCGT
TCACCTAATGTGGGTAGCAGTCCACCAACCACACCGAATCGAGCTACCGATAGCGACATG
GCGCACAACCCGGTAAAACGCGCAAAAATTATATGCTCGCCGGAGCAAGAAGCCCAAAAG
CGCGAAACCAACCGCTTGACCGAAGAGGTTCTCAGCCGATTTCAGCATTCCGCTGGAATA
TTGCCCTTTTACCCATTCTTCGACCAGCGCAGGATGCAGTTGCCAGCTCCTCTAGTCGGT
GTGCAAGAAAAAGAACGGCCCTCGGAGACCGAAGAGAATTTTGTTAGATCCGATGAGCAA
AGCGAAAAGGACGACGAGAGGAGAGACTCTGGATATGGCGATAGTCCCGGACACGATGGT
GAGCTGCTCAAAATTGCGAGTCGAGACCCAAAGCCTGCGACCAAGTCGGTTGAGAGGGAA
CGAAGTGAAACCATTGTCGGTGACGACCCTTCTTCAGCTGGAAATGGGGCTCTGGATCTC
ACTGTAAAACCTTCATCGCGCAATTCGTCTCCACCCTTGATTCCAAGATCACCTGTTGCA
TTCTCAACACCGACAAAACAAAAAGCACCAAACAAAAAATCCCCAATGAGCAAGATGGTA
GATGATGCGAAACCAGATCGGGAACGCCATCTTAAATTTTTGTTGCAATCCGGATTTCAA
CCGATTCACCTAAATGCTTTGAAACATTCAACGCCAAAGTCAGAGCCTGCTGGTGAAAAA
CATCATCCAAGCATGATTGGGTTTGAACGTTTCAGACCAGCGCCCTTTTCACAAGCCCAA
TTTTTCGCACAGTCACAGAGATCATACGGGGGCGCAATGTGTGAGAACAACTCCAATCTC
CATGTCAAGGATTTGCAGAGAGTTCATCCGAGTCCACATCAGTCGCCATCTTTTCATTCT
CTACCTTACAACGGTGAACTGTCACCCAACGACGCGGCTTTGGACCGAAACAGCCAACTC
TCTCCAGCAGCACTACGCGAGCTGGTGAAGACTGGAGCCAGCCCGAACGTGCCGTTTCCG
TTGGCGCCCATGCGTCAGAAGATTCCCGGGAAAAAGAAAGAGCTGCTCACTTGTCCAATG
CCCGGATGCGACGGAAGTGGACATTCTACAGGCAATTACACGTCACACAGAAGCTTGTCA
GGATGCCCACTTGCTCCCAGAGGATTGGTCACAGCCTGCGCCTCAGAGATGAAGTGCCCA
ACCGAAGGATGCGACGGTTCAGGACACGTCACAGGAAACTACACGTCTCATAGAAGCTCG
TCAGGTTGTCCCTTGGCAAGAAAAAATCGTGCTTCCCAACATGGAATGTCAAAGTCCCCT
GGAGCCGCAAACAATCTTATGGCGAACGATGATACGTTTGACATAAACAGATCGGCCTCC
ACATCGCAGTCTTTCACTGGCGGGTTGTCACAACAGAATATAGAAGACAAACAGCACAAT
AAACCACACTTCCTCTGTCAACCTGAGCAGAAAGTGTTTACCACGAAGGCATCACCGCGC
AGTGACAGCTACGATATGCCGAGCATGATTCATAAGCGCGTTCCTTTTGCCATGGCACGC
GATTCGTATTTCGCTTTAACAAACTTGGACGACAGACGCTGCGAACGAAACACTTCGGAT
CCAATTGACGAGCGCGTTAGCGTCCACAACCGACAACAATCACTCGACTGCCCCAGAACC
ATTAGCGAAGCAACACAACCATTAGAGACTCAGCCCAACTTAAATGAAACTGACAAAAGC
AGCGATATCCCAACTCCTGATCAGACAGAGCACACTGACCAGACCTTGGACAGTCGCATG
GAATTGGAAAGCGAAAAAAGCGAAAACGAGCAGGACGAACCACAAGAATCAGAACGTGAA
CTACTCGGATATCTGGCCGGGATCGCTCTGCCCCATTCCCGGGAATTCCCAACTCGCGAA
AATTTCCGCTCCTACTTGGCCAATTTACGTCATTGCTGTCAAAACCCAGGGAATCCTGAC
AACCAAGCCCTTTTGGACGCCGTTCGCGAGGCTGTGCCGTCAAACTTTGATCTGACCAAG
TTTATTTCTTAA

InterProScan

ProSiteProfiles
Znf_C2HC (IPR002515) - T[276-319] 16.644 - T[321-364] 16.42 - T[909-952] 18.191 - T[955-993] 10.839
SUPERFAMILY
Znf_C2HC_sf (IPR036060) - T[282-322] 5.75E-14 - T[328-367] 3.4E-13 - T[916-953] 4.45E-13 - T[956-994] 3.14E-14
Pfam
Znf_C2HC (IPR002515) - T[284-311] 4.1E-11 - T[329-357] 2.3E-13 - T[917-945] 1.4E-13 - T[958-986] 1.5E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MYT1L_HUMAN 58.763 % 128 7.18E-30
MYT1_HUMAN 72.84 % 130 2.17E-30
ST18_HUMAN 73.75 % 129 2.51E-30