- EST 'AHC0AAA227YJ07_RM1' >
- Transcript 'Phmamm.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S572.g10178.01.t
Possible name(s)
ALOX12B; ALOX5
Gene model
Location
S572 [33,836 / 41,231]
Amino acid sequence
Length: 541
>Phmamm.CG.MTP2014.S572.g10178.01.p
MTALYITAKLPHQETSPMVQDLRRSEIISNRERFQWYPAPMSEDDFGWGLNRFMNAKNFL
ELPKIFLRTFDHMKSIGGSGLDVAYNTGTNILRGLFKSIKTLDDYKQLYKHLGHKDPIFI
DDWMKDEEMGRQVLTGISPLAFERCNVIPDYCDVTDHDVRGLLPQDSSLETEIKAGRVYI
ADYTFVKDIERNKNPKTGDPFVCADCLGLFYASKEDGLFRPIAIQLIPNDRASVFTPNDS
HYDWLLAKMYFRATTSSIHEWHYHFLSTHGVSETFCISTLRSFPRCHPLYKLLRPHLITV
PTINTDARTVIMPQGSLANRSNSLRTDDPNLLPNYHYRDDAILLWQVMEKYVENILKICY
NSEDDVVNDNELQDWVFELAHEGFGWQDKNTRGFPDQISSISQLVHLCTIIIFTSSAQHA
SVNFGQMESYQFVPNSPGCMTLPVHKKGEATLDRIIATLPDVATSSIFISFSYSLSRFND
DEVYLGEFPERLFTEDSVAKIQQEFRDNLATVEKQIVERNNGLKYSYTYLMPNKIPNSIA
I
Nucleotide sequence
Length: 1,626
>Phmamm.CG.MTP2014.S572.g10178.01.t
ATGACTGCGTTATATATTACAGCTAAGCTGCCTCATCAGGAAACTTCACCAATGGTTCAG
GATTTACGTAGAAGTGAAATTATTTCAAACCGGGAAAGATTTCAATGGTACCCGGCTCCA
ATGTCCGAGGATGATTTTGGCTGGGGTTTAAATCGCTTTATGAATGCAAAGAATTTTCTC
GAATTGCCAAAGATTTTCCTTCGAACTTTCGATCATATGAAAAGCATTGGAGGTTCTGGT
TTGGACGTTGCATACAACACGGGAACCAACATTTTACGTGGTCTTTTTAAATCTATCAAG
ACTCTGGACGATTACAAGCAACTCTACAAACACTTGGGGCACAAAGATCCTATTTTTATT
GACGATTGGATGAAAGACGAGGAAATGGGTCGACAGGTTCTTACTGGAATATCTCCGCTC
GCGTTCGAACGTTGCAACGTCATTCCCGACTACTGTGACGTAACCGACCATGACGTCAGA
GGACTGCTTCCTCAAGACTCGTCACTGGAAACCGAAATAAAGGCGGGGCGTGTTTACATT
GCCGATTATACCTTCGTGAAAGACATAGAAAGGAACAAGAACCCCAAGACTGGTGATCCT
TTTGTTTGTGCTGACTGCTTGGGACTTTTCTATGCCTCAAAAGAAGATGGCCTGTTTCGT
CCCATTGCAATTCAGCTAATCCCGAACGATAGAGCTTCCGTTTTTACCCCAAATGATTCC
CACTACGACTGGCTTCTAGCAAAAATGTATTTTCGGGCGACAACGTCTTCAATTCACGAG
TGGCACTATCATTTTCTATCCACGCATGGTGTATCAGAGACCTTTTGTATCTCGACACTT
CGTTCTTTTCCTCGATGCCATCCGCTCTACAAACTACTGCGACCTCATCTTATAACGGTT
CCGACTATCAATACTGATGCAAGGACTGTAATCATGCCACAAGGGTCGTTGGCAAATAGA
TCAAATAGTCTCAGGACCGATGATCCAAACTTGCTTCCGAACTATCACTATCGGGATGAC
GCAATTCTATTGTGGCAAGTGATGGAAAAATATGTTGAGAACATTTTAAAAATTTGTTAC
AATTCAGAAGACGATGTAGTTAACGACAACGAACTTCAAGACTGGGTATTCGAATTGGCG
CATGAAGGTTTCGGATGGCAAGACAAAAATACCAGAGGATTTCCCGATCAAATCTCCTCC
ATCTCACAACTGGTCCACTTGTGTACAATCATAATCTTTACAAGCTCAGCACAACATGCG
TCTGTCAACTTCGGTCAAATGGAATCTTATCAGTTTGTTCCCAACTCCCCAGGGTGCATG
ACTCTTCCGGTGCATAAGAAAGGCGAGGCAACATTGGATCGAATAATCGCAACACTTCCG
GATGTTGCAACCTCAAGCATTTTTATTTCGTTTTCGTATTCACTATCCCGCTTTAATGAT
GATGAGGTATACCTTGGAGAATTTCCGGAAAGACTTTTTACTGAAGACTCAGTAGCAAAA
ATACAACAGGAGTTCCGAGATAACCTAGCAACAGTTGAAAAACAAATTGTGGAAAGAAAC
AACGGATTGAAATATTCTTACACCTATCTTATGCCTAATAAAATACCTAACAGTATCGCA
ATATAA
| ProSiteProfiles |
LipOase_C (IPR013819) - T[9-541] 89.207 |
| SUPERFAMILY |
LipOase_C_sf (IPR036226) - T[13-541] 4.84E-124 |
| PANTHER |
LipOase (IPR000907) - T[80-541] 8.6E-134 |
| Pfam |
LipOase_C (IPR013819) - T[122-318] 7.1E-23 - T[332-524] 2.2E-32 |
| PRINTS |
LipOase_C (IPR013819) - T[241-258] 1.9E-8 - T[259-276] 1.9E-8 - T[279-299] 1.9E-8 |
| ProSitePatterns |
LipOase_CS (IPR020834) - T[286-296] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LOX5_HUMAN | 30.503 % | 275 | 3.12E-84 |
| LX12B_HUMAN | 34.535 % | 276 | 2.08E-84 |
| LX15B_HUMAN | 34.504 % | 265 | 1.02E-80 |