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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S5788.g18878.01.t

Possible name(s)

AMY1A; AMY1B; AMY2B

Gene model

Phmamm.CG.MTP2014.S5788.g18878

Location

S5788 [298 / 2,082]

Sequences

Amino acid sequence

Length: 224

>Phmamm.CG.MTP2014.S5788.g18878.01.p
MSPGEPVSASEYYYLGRVTEFEYGYNLASNLNSIQNLGNFGEAWGMMPDMNALVFLSNHD
NQRGHGAGGDVITFEDPYGPPPNQRSVNADGTCGNGWVCEHRWRQIKNMAAFAAAAAGQP
VTNWWSAIDQIAFSRGNKAFLAINKASGTMSGSFQTGMPAGEYCNVNSGDIVNNACTGSC
VSVDGSGFASISIPPSSDPVVAIHVNAPCNCPSGDCSSNVVPLS

Nucleotide sequence

Length: 675

>Phmamm.CG.MTP2014.S5788.g18878.01.t
ATGTCTCCAGGCGAACCAGTGTCCGCATCCGAATATTACTATCTCGGAAGAGTAACGGAG
TTCGAGTACGGATATAATTTGGCCAGCAACCTCAACAGCATTCAGAATTTAGGCAACTTC
GGCGAAGCTTGGGGCATGATGCCTGACATGAACGCCCTTGTCTTCCTCAGTAACCATGAC
AACCAGAGAGGACATGGCGCAGGAGGAGATGTTATCACCTTCGAAGACCCATACGGTCCA
CCGCCAAACCAGCGAAGCGTAAATGCTGATGGAACTTGTGGCAATGGATGGGTTTGCGAA
CACAGATGGAGACAAATCAAGAACATGGCCGCATTTGCTGCCGCTGCTGCAGGGCAACCT
GTAACCAACTGGTGGAGTGCAATAGATCAGATTGCATTTTCCCGTGGAAACAAGGCTTTC
CTCGCCATCAACAAGGCTTCGGGAACAATGAGTGGATCTTTCCAGACCGGAATGCCAGCT
GGAGAATATTGCAATGTTAACTCTGGGGACATTGTCAACAACGCATGCACAGGGTCTTGT
GTTAGCGTCGATGGATCAGGCTTCGCATCAATAAGCATTCCACCATCATCTGATCCGGTT
GTGGCCATTCACGTCAACGCTCCATGCAACTGCCCGAGTGGAGATTGCTCGTCTAACGTT
GTACCACTTAGCTAA

InterProScan

SUPERFAMILY
Glycoside_hydrolase_SF (IPR017853) - T[11-164] 2.46E-13
Gene3D
Glyco_hydro_b (IPR013780) - T[119-208] 5.7E-30
SMART
A-amylase_C (IPR031319) - T[122-208] 1.2E-34
Pfam
A-amylase/branching_C (IPR006048) - T[129-197] 3.7E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
AMYP_HUMAN 42.188 % 187 1.58E-56
AMY1_HUMAN 42.969 % 189 1.51E-57
AMY2B_HUMAN 42.969 % 189 1.29E-57