Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S58.g02096.03.t

Possible name(s)

AL049697.1; CFAP206; RNF103

Gene model

Phmamm.CG.MTP2014.S58.g02096

Location

S58 [141,206 / 143,192]

Sequences

Amino acid sequence

Length: 484

>Phmamm.CG.MTP2014.S58.g02096.03.p
MIGVNAGQIFCKDSPDLCESRSFLTSQLILGYHYGGYHKLHLHTLTLPTNCGSAFKWINT
IFNQKLEVSSSLSDFKHSLVNKKPDKNHIQVLYISAAKLTPAVFGSLQLHFGKISVGKFD
FSADSVDVNSLLSPDTFVSNSIVHFKTHKTEFLYGNKTAEHMTFSHLSMYLMMLNPDINL
FFTFSVYMCNVLGALSIFTCQGYVVSRGFAVLKSLLAYNIVLLGAWLLFSSVHFQPLNEL
IENFTGILQQANSTDVAAFIRSGVIRAMQMPYLFLTGFIVFFNFAFIALQRLGLISYEHE
YELTELLLDNDAQGTNDISHRWIQRLATPELWLQPLIPNDYIDELPVWEYSPIANSSDAP
ENDRCLSDRTSSVSPVRSNEPNQERGRPCFPSSPRQTPTLSHGILRSIRTCLRGRSPRLK
RTKGPPKNMRRDTSCAICLDHFRCHVLVCGLPCSHVFHNSCIQEWLYNDKHCCPVCRWPA
FKAK

Nucleotide sequence

Length: 1,655

>Phmamm.CG.MTP2014.S58.g02096.03.t
GTAGGAAGAAGTCACATTTGCCCAGTTTGTTGATGAAAACCAGCCTGAAAGCACAAGATT
TTACACAAGCAGTGAACTTGATGAAAGCTTGAACAAAGCTGGAGATGTTTGGCTTGTGCA
GGTAATTACTGAGGACAACAATGGAAACATTTCACCTTTAGAATGGAAAAAGCTGATTAA
AAGAACGGCAATGATAGGGGTCAATGCAGGACAGATATTCTGCAAGGATTCACCTGATTT
ATGTGAATCAAGATCTTTTTTGACTTCCCAACTAATTCTTGGCTACCATTATGGCGGTTA
TCATAAGCTTCATCTACACACTTTAACTCTTCCTACAAATTGTGGTTCTGCTTTCAAATG
GATCAACACAATTTTCAATCAAAAGTTGGAAGTGTCCTCAAGTTTGTCAGATTTTAAACA
TAGCTTGGTAAACAAAAAGCCTGACAAGAATCACATTCAAGTTTTGTACATTTCGGCAGC
AAAATTGACTCCTGCTGTTTTTGGTTCCTTGCAACTTCACTTCGGCAAAATTTCAGTGGG
CAAATTCGATTTTTCTGCTGATAGTGTTGATGTAAATAGTTTATTATCACCAGATACTTT
TGTTTCAAACTCTATTGTACATTTTAAAACACATAAAACTGAGTTTCTATATGGGAACAA
AACAGCAGAACACATGACATTTTCCCATTTATCAATGTATTTAATGATGCTTAATCCTGA
CATAAATCTATTTTTTACATTCAGTGTGTACATGTGCAATGTATTGGGTGCTTTATCCAT
TTTCACCTGTCAAGGTTATGTTGTGTCTCGCGGATTTGCGGTGTTAAAATCCTTACTTGC
CTACAATATTGTTTTGCTTGGTGCATGGTTGTTGTTTTCAAGTGTACATTTTCAACCTTT
AAATGAACTTATAGAAAATTTCACAGGAATTTTACAACAAGCAAATTCAACAGATGTTGC
AGCTTTCATTCGCTCTGGTGTGATAAGGGCTATGCAAATGCCTTACCTTTTTCTCACTGG
GTTTATTGTATTTTTTAACTTTGCGTTTATTGCTCTACAAAGGTTGGGCCTAATTTCCTA
CGAACATGAATATGAACTTACAGAATTGCTGCTGGACAATGATGCCCAAGGGACAAATGA
TATTTCTCATCGCTGGATACAAAGACTGGCCACACCTGAACTATGGCTACAACCTCTTAT
TCCTAATGATTACATTGATGAACTGCCTGTTTGGGAGTACTCTCCAATTGCTAATAGTTC
AGATGCTCCAGAAAATGACAGATGTCTATCTGACAGAACATCATCAGTGTCTCCAGTACG
TTCCAATGAACCAAACCAAGAAAGAGGAAGACCTTGTTTTCCATCCAGCCCAAGACAAAC
ACCAACTTTATCACATGGAATACTGAGATCGATTCGCACTTGCCTGCGGGGAAGAAGTCC
CCGACTCAAAAGAACAAAGGGTCCCCCCAAAAATATGAGGAGAGACACCTCATGTGCCAT
ATGCTTGGATCATTTCAGGTGCCACGTATTGGTTTGCGGCCTTCCTTGTAGTCATGTGTT
TCACAATAGTTGCATTCAAGAGTGGTTGTACAATGATAAACACTGTTGTCCTGTTTGTCG
TTGGCCGGCATTTAAGGCCAAGTAAACGATAGAAA

InterProScan

Gene3D	Znf_RING/FYVE/PHD (IPR013083) - T[412-480] 9.2E-13
Pfam	Znf_RING (IPR001841) - T[434-477] 6.3E-8
ProSiteProfiles	Znf_RING (IPR001841) - T[435-477] 12.696
SMART	Znf_RING (IPR001841) - T[435-476] 0.002

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RN103_HUMAN	24.723 %	166	9.98E-45