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TRANSCRIPT CARD

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  1. Clone 'cien60326' > 
  2. Transcript 'Phmamm.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S596.g10408.01.t

Possible name(s)

RPL9

Gene model

Phmamm.CG.MTP2014.S596.g10408

Location

S596 [32,859 / 36,014]

Sequences

Amino acid sequence

Length: 191

>Phmamm.CG.MTP2014.S596.g10408.01.p
MKNIHSNEVVTLPDNVSVWVKGRIVTVRGPRGRLVKNFGHLKVELTKVGKNSVRVDKWFG
TRKDLSCVRTICSHIKNMATGVTKGYKYKMRSVYAHFPINCNITDEGTKIEIRNFLGEKF
VRRVNMKEGVVVSASPKQKDELILQGNDIEQVSLSAALIQQSTTVKNKDIRKFLDGIYVS
QKTTVEEEEGS

Nucleotide sequence

Length: 576

>Phmamm.CG.MTP2014.S596.g10408.01.t
ATGAAGAACATTCACTCGAATGAAGTTGTTACGCTTCCAGATAACGTGAGTGTCTGGGTA
AAAGGGCGCATTGTCACCGTCAGAGGACCAAGGGGTCGTCTTGTAAAAAACTTTGGCCAT
CTCAAAGTCGAGCTGACAAAGGTCGGCAAGAACAGTGTCAGGGTGGACAAATGGTTTGGA
ACACGCAAGGACCTGTCATGTGTGCGTACAATTTGCAGTCATATTAAAAACATGGCTACT
GGTGTCACAAAGGGATACAAATACAAAATGAGATCAGTTTATGCTCATTTTCCCATCAAC
TGTAACATCACTGATGAAGGAACTAAAATTGAGATTAGGAATTTCCTCGGTGAGAAGTTT
GTCAGGCGAGTGAACATGAAGGAAGGTGTGGTCGTGTCTGCCTCCCCAAAACAAAAGGAT
GAGCTCATTTTGCAAGGAAATGACATTGAACAAGTTTCCCTCTCAGCTGCGCTCATCCAG
CAGTCCACAACCGTAAAGAACAAGGACATCCGCAAGTTTTTGGATGGTATCTATGTGTCA
CAAAAGACCACAGTTGAGGAGGAAGAGGGAAGTTAA

InterProScan

PIRSF
Ribosomal_L6 (IPR000702) - T[1-184] 1.6E-30
PANTHER
Ribosomal_L6 (IPR000702) - T[1-188] 9.3E-89
SUPERFAMILY
Ribosomal_L6_a/b-dom_sf (IPR036789) - T[1-85] 1.32E-21 - T[86-182] 2.08E-28
Gene3D
Ribosomal_L6_a/b-dom_sf (IPR036789) - T[1-85] 1.9E-32 - T[86-190] 1.0E-45
Pfam
Ribosomal_L6_a/b-dom (IPR020040) - T[13-85] 9.7E-15 - T[97-176] 2.5E-11
ProSitePatterns
Ribosomal_L6_CS2 (IPR002359) - T[161-182] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL9_HUMAN 63.874 % 253 8.86E-87