- Transcript 'Phmamm.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S601.g10462.01.t
Possible name(s)
GSPT1; GSPT2; HBS1L
Gene model
Location
S601 [50,297 / 52,985]
Amino acid sequence
Length: 574
>Phmamm.CG.MTP2014.S601.g10462.01.p
MMNGKEVPDEWDDTSGDAGNVASSLTYLNIDAKPFVPNVNAAAFVPISKQQTPADALKSV
PNISTTNITPQGDNVNEQMMEKEENTEVQLQEVKTDAKEDLKVDNEQNEEVVPAEEVPLP
KSSSQELKRATNERSTPPISQETEPEPGMKEDHLNVVFIGHVDAGKSTIGGQIMYLTGMV
DKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETETKHFTILDAPG
HRSFVPNMIGGASQADIAVLVISARRGEFETGFERGGQTREHAMLAKTAGVQRLIVLINK
MDDPTVNWRQERYEECKEKLTPFLKKVGFNPKKDVHFMPCSGLTGTNLKEPEYSKHPWYT
DLPLIPYLDNLPTVSRSGTGPVRLPIVDKYKDMGVIIIGKIESGKILKGQSLILQPNKKK
VKVLAIQSDEVDTETAQAGENVKIRLDSVEEDEISKGFVLCSPGDLCCTGTLFDAQIAII
EYKSIICAGYSAILHIHTCIEEVVIKQLLYLLDRKTGEKKKTRFVKQDQTVIARLQTQGP
VCIESFKDFAQMGRFTLRDEGRTIAIGKVLKVIE
Nucleotide sequence
Length: 1,725
>Phmamm.CG.MTP2014.S601.g10462.01.t
ATGATGAATGGAAAAGAAGTTCCAGATGAGTGGGATGATACAAGTGGAGATGCTGGTAAT
GTGGCATCATCTTTAACATACCTTAATATTGATGCTAAGCCATTTGTCCCTAATGTAAAT
GCTGCTGCGTTTGTACCAATTTCCAAACAACAAACACCAGCAGACGCTCTTAAAAGTGTT
CCCAACATTTCAACAACCAATATTACGCCACAAGGGGACAATGTCAACGAACAGATGATG
GAAAAAGAAGAGAATACAGAAGTCCAGCTACAAGAAGTAAAAACAGATGCCAAGGAAGAT
TTAAAAGTAGATAATGAACAAAATGAAGAAGTTGTTCCAGCAGAGGAAGTACCCCTTCCA
AAATCTTCCTCTCAGGAATTGAAAAGAGCCACCAACGAAAGATCAACCCCTCCTATTTCC
CAAGAGACTGAGCCTGAACCTGGAATGAAAGAAGACCATTTGAATGTAGTTTTTATTGGA
CATGTTGATGCTGGTAAGTCCACTATTGGCGGCCAAATAATGTACCTTACTGGGATGGTT
GATAAACGTACACTGGAAAAGTATGAACGAGAGGCGAAGGAAAAGAACCGCGAAACTTGG
TATCTTTCCTGGGCACTGGACACAAACCAGGAGGAGAGGGACAAGGGAAAAACTGTTGAA
GTGGGCAGAGCATATTTTGAAACTGAAACTAAACATTTTACAATCCTTGATGCACCTGGT
CACAGAAGTTTTGTGCCAAATATGATCGGAGGGGCATCACAAGCAGATATTGCTGTCCTG
GTAATATCAGCGAGAAGAGGGGAATTCGAGACTGGTTTTGAGCGCGGTGGTCAAACTCGT
GAACATGCGATGCTGGCTAAAACAGCTGGAGTTCAACGACTGATTGTGCTCATAAACAAA
ATGGATGATCCGACTGTTAACTGGAGGCAGGAACGGTATGAGGAATGCAAAGAAAAACTT
ACACCCTTTCTTAAAAAAGTTGGATTTAACCCAAAGAAAGACGTTCACTTTATGCCATGT
TCTGGTTTAACGGGAACTAATCTAAAGGAACCAGAATACTCAAAGCACCCCTGGTACACA
GACCTTCCACTTATTCCATATTTAGATAATCTTCCAACAGTTTCCCGTTCTGGAACTGGC
CCAGTAAGACTGCCCATTGTGGACAAGTACAAGGACATGGGTGTTATTATCATTGGTAAA
ATTGAGTCTGGAAAAATCCTAAAGGGCCAAAGCCTAATTTTGCAGCCAAACAAAAAGAAA
GTAAAAGTGCTTGCAATTCAGTCTGATGAAGTTGACACTGAAACTGCTCAGGCTGGGGAA
AATGTCAAAATTCGACTAGACTCTGTTGAAGAAGATGAAATTTCAAAGGGATTTGTGCTG
TGTTCACCAGGCGATCTCTGTTGCACTGGAACACTTTTTGATGCCCAAATCGCAATAATC
GAGTACAAATCAATCATCTGCGCAGGATACAGTGCAATCCTGCATATTCACACATGCATT
GAGGAGGTGGTAATAAAACAACTGCTTTATCTTCTTGATCGCAAAACTGGAGAGAAAAAG
AAAACTAGATTTGTTAAACAAGATCAAACTGTTATAGCCCGACTACAAACCCAAGGACCA
GTTTGTATTGAAAGTTTCAAAGACTTTGCCCAAATGGGTCGTTTTACGCTGCGAGATGAA
GGTCGTACTATCGCCATTGGCAAGGTTCTCAAGGTCATCGAGTAA
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[148-350] 3.73E-61 |
| ProSiteProfiles |
TF_GTP-bd_dom (IPR000795) - T[151-376] 55.992 |
| Pfam |
TF_GTP-bd_dom (IPR000795) - T[152-349] 5.2E-46 |
| PRINTS |
TF_GTP-bd_dom (IPR000795) - T[155-168] 5.1E-16 - T[214-222] 5.1E-16 - T[234-244] 5.1E-16 - T[250-261] 5.1E-16 - T[294-303] 5.1E-16 |
| ProSitePatterns |
G_TR_CS (IPR031157) - T[207-222] . |
| SUPERFAMILY |
Transl_B-barrel_sf (IPR009000) - T[376-466] 2.08E-20 |
| Pfam |
Transl_elong_EFTu/EF1A_C (IPR004160) - T[471-572] 5.4E-30 |
| SUPERFAMILY |
Transl_elong_EF1A/Init_IF2_C (IPR009001) - T[472-573] 1.17E-29 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HBS1L_HUMAN | 42.95 % | 356 | 6.46E-115 |
| ERF3A_HUMAN | 77.03 % | 701 | 0 |
| ERF3B_HUMAN | 63.258 % | 711 | 0 |