- Transcript 'Phfumi.CG.MTP2014.S8...' >
- Transcript 'Phmamm.CG.MTP2014.S6...' >
- Transcript 'Phmamm.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S605.g10495.01.t
Possible name(s)
CCT2; CCT7; TCP1
Gene model
Location
S605 [50,114 / 55,473]
Amino acid sequence
Length: 552
>Phmamm.CG.MTP2014.S605.g10495.01.p
MMSLNPVSIYSQGAEEERAEIARMSSFVGAIAIGDLVKSTLGPKGMDKILMSPGQGPSSE
PGITVTNDGATILKSVGVDNPAAKVLVDLAKVQDDEVGDGTTSVTVLAAELLREAEKLIA
QKFHPQTIVRGWRMAVAAAKKALDDAAIDNGNNEELFKQDLMNIARTTLSSKLLTQHKDF
FAKMAVDAILRLKGSGNLEAIQARFFTSNIQNTGKMKNIIKKLGGTMTDSCLDEGFLLDK
KIGMNQPKRLENAKIMIANTSMDTDKIKIFGSRVRVDGTAKVAEIELAEKTKMKEKCEKI
LSHGINCFINRQLIYNYPEQLFADANVMAIEHADFEGVERLALVLGGEICSTFDRPDLVT
LGHCDLIEEVMIGEDKLIKFSGVARAEACTIILRGATKQILDEAERSLHDALCVLQRTVA
ETRTVQGGGCCEALMANAVHISAMKTPGKESVAMESFGKALLQIPVTIADNAGFDSAELV
SQLRAAHAEGKNSFGLDMEEGEIACMKSLGITESYQVKRQVLLSAAEAAEMILRVDNIIR
SAPRKRRPDHPH
Nucleotide sequence
Length: 1,659
>Phmamm.CG.MTP2014.S605.g10495.01.t
ATGATGTCCCTAAATCCAGTTTCGATTTATTCTCAAGGAGCAGAGGAAGAGAGGGCGGAA
ATTGCAAGAATGTCTTCTTTTGTTGGAGCCATTGCAATTGGTGACCTTGTAAAAAGCACT
CTGGGGCCAAAAGGAATGGACAAAATTCTTATGAGTCCCGGACAAGGCCCTTCATCTGAA
CCTGGTATCACAGTAACCAATGATGGAGCAACCATCTTGAAATCTGTTGGAGTTGATAAT
CCAGCTGCAAAGGTTCTTGTTGATCTTGCAAAGGTCCAAGATGATGAGGTTGGAGATGGA
ACTACATCTGTCACTGTGTTAGCTGCCGAACTTCTCAGGGAAGCAGAAAAACTTATTGCC
CAAAAATTTCATCCTCAAACTATTGTCAGAGGATGGAGAATGGCTGTTGCAGCTGCAAAA
AAAGCATTGGATGATGCTGCCATTGATAATGGAAATAATGAGGAGCTTTTTAAACAAGAT
TTGATGAATATTGCCCGCACAACACTCAGCTCCAAACTTCTTACACAACACAAAGATTTT
TTTGCCAAAATGGCTGTTGACGCAATATTAAGATTAAAGGGAAGTGGAAATCTTGAAGCT
ATACAGGCAAGGTTTTTTACCAGCAACATTCAAAACACAGGAAAAATGAAAAATATCATC
AAAAAGCTCGGTGGCACAATGACTGACTCTTGTCTGGATGAAGGATTCCTCCTTGACAAA
AAGATTGGAATGAATCAGCCAAAACGACTTGAGAATGCCAAGATTATGATTGCAAACACT
TCTATGGACACAGACAAAATTAAAATTTTCGGATCAAGAGTAAGAGTAGATGGAACAGCA
AAAGTGGCTGAAATTGAACTTGCGGAAAAAACTAAGATGAAGGAAAAATGTGAAAAGATA
CTTAGTCATGGTATCAATTGCTTTATTAACAGGCAGTTAATCTACAATTACCCAGAGCAG
TTATTTGCTGATGCTAATGTGATGGCCATCGAACATGCTGATTTTGAGGGAGTAGAAAGA
CTTGCACTTGTGCTGGGTGGAGAAATCTGCTCAACATTTGACAGACCTGACCTTGTAACA
CTCGGACATTGTGACCTGATTGAAGAGGTGATGATTGGTGAAGACAAACTGATCAAGTTT
TCAGGTGTTGCTAGAGCAGAAGCATGCACAATCATTCTCCGCGGTGCTACCAAACAGATT
CTTGATGAAGCCGAGCGTTCCCTACATGATGCCCTTTGCGTTTTGCAGCGAACAGTTGCC
GAGACCCGAACTGTGCAGGGTGGAGGTTGTTGTGAGGCATTAATGGCAAATGCTGTTCAT
ATTTCTGCAATGAAAACCCCTGGTAAAGAATCTGTGGCCATGGAATCTTTTGGAAAAGCA
CTTTTACAGATTCCAGTTACCATTGCGGACAATGCAGGTTTTGACAGTGCTGAACTTGTG
TCTCAATTGAGAGCTGCCCATGCAGAAGGAAAAAACTCCTTTGGCCTAGATATGGAGGAG
GGCGAAATAGCTTGTATGAAAAGTCTCGGCATCACAGAGTCGTACCAAGTCAAACGACAG
GTGCTGCTAAGTGCCGCAGAAGCTGCTGAAATGATCCTAAGAGTTGACAACATCATTAGA
TCCGCACCAAGGAAACGACGACCTGATCATCCCCACTAA
| PANTHER |
Chap_CCT_beta (IPR012716) - T[4-546] 3.5E-277 |
| CDD |
Chap_CCT_beta (IPR012716) - T[9-545] 0.0 |
| TIGRFAM |
Chap_CCT_beta (IPR012716) - T[9-546] 4.0E-273 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[17-542] 4.32E-76 |
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[32-539] 2.4E-179 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[34-541] 1.3E-141 |
| PRINTS |
Chaperone_TCP-1 (IPR017998) - T[35-51] 2.5E-24 - T[93-112] 2.5E-24 - T[390-412] 2.5E-24 - T[424-436] 2.5E-24 |
| ProSitePatterns |
Chaperonin_TCP-1_CS (IPR002194) - T[38-50] . - T[65-81] . - T[93-101] . |
| Gene3D |
TCP-1-like_intermed_sf (IPR027410) - T[149-422] 2.4E-179 |
| SUPERFAMILY |
TCP-1-like_intermed_sf (IPR027410) - T[158-421] 1.86E-24 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[229-395] 1.23E-41 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[234-386] 2.4E-179 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCPA_HUMAN | 35.536 % | 299 | 9.38E-95 |
| TCPH_HUMAN | 34.489 % | 297 | 4.04E-94 |
| TCPB_HUMAN | 74.135 % | 795 | 0 |