- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C11.698.v2...' >
- Transcript 'Phmamm.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S614.g10575.01.t
Possible name(s)
RCN2; RCN3; SDF4
Gene model
Location
S614 [67,088 / 71,609]
Amino acid sequence
Length: 340
>Phmamm.CG.MTP2014.S614.g10575.01.p
MITKYYFIFTESKDGDANPNEEDDAAKKIKTEIEDDLAPPKHLDAVKIGRDGNLNSNFHK
EVFLGEDLDNFENGNYELKDQKSKLEEIFHLIDTNKDKHLDNSELTAWVLSKTREHFEEA
KRGNAQQFAKIDTDGDNQITWNEYLAEFLAQRNFDKKSVAEKLKNSEKIEISKDVEDEVE
DARDKWMQSASEGETDFLTSEQFLDFQHPETSKGMLQYLVEDFLHDMDIDGDGELSIHEY
MSVGSDVDVDTQADEWAQIRKKEFRNVMDVNHDNKVTKDELEKYLDPLSENMAEQEARQL
IAFGDDDGDDRLSLDELLENSEFYTGSKLYNYAKSVHDDL
Nucleotide sequence
Length: 1,023
>Phmamm.CG.MTP2014.S614.g10575.01.t
ATGATTACAAAATATTATTTCATTTTTACAGAAAGCAAAGATGGTGACGCAAATCCAAAT
GAAGAGGATGATGCAGCAAAGAAAATTAAGACTGAAATTGAAGATGATTTGGCCCCACCA
AAACATCTCGATGCAGTAAAAATTGGACGTGATGGGAACCTGAACTCCAACTTCCACAAG
GAAGTCTTTCTGGGTGAAGACCTAGACAATTTTGAGAATGGGAATTATGAGTTAAAAGAT
CAAAAGTCAAAACTAGAAGAAATCTTTCATTTAATTGATACAAACAAAGACAAACACCTT
GATAACTCTGAACTAACAGCCTGGGTTCTCTCAAAGACAAGAGAACATTTTGAAGAAGCA
AAGCGAGGAAATGCTCAGCAGTTTGCAAAGATTGATACTGATGGTGACAATCAAATCACT
TGGAACGAATACCTCGCTGAATTTCTGGCACAAAGAAATTTTGACAAGAAAAGTGTTGCT
GAAAAGTTGAAAAACAGTGAAAAGATAGAAATTAGTAAAGATGTTGAAGATGAGGTGGAA
GATGCAAGAGATAAATGGATGCAGTCTGCAAGTGAAGGAGAGACAGACTTTCTTACTTCA
GAGCAATTCCTTGACTTCCAACATCCTGAAACAAGCAAAGGCATGCTTCAGTATCTAGTT
GAAGACTTTCTGCATGACATGGATATCGATGGCGACGGAGAACTTTCCATCCATGAATAC
ATGTCAGTGGGTTCGGATGTTGATGTCGACACACAAGCAGATGAATGGGCACAAATCAGA
AAAAAAGAATTCCGTAATGTCATGGATGTGAATCATGATAACAAAGTCACCAAAGACGAA
CTTGAGAAATACCTGGACCCACTGAGTGAAAACATGGCTGAGCAAGAAGCAAGACAACTT
ATAGCATTTGGTGATGATGACGGTGATGACAGGCTTTCATTGGACGAACTGCTTGAAAAC
AGCGAGTTTTACACTGGTAGCAAACTTTACAACTATGCGAAGAGCGTACATGATGATCTG
TAG
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[80-115] 11.166 - T[119-154] 7.707 - T[220-250] 7.846 - T[266-291] 8.293 - T[292-327] 6.507 |
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[80-241] 2.88E-14 - T[190-333] 5.43E-18 |
| Pfam |
EF_hand_dom (IPR002048) - T[83-146] 1.1E-7 - T[221-241] 0.047 - T[267-283] 0.022 |
| SMART |
EF_hand_dom (IPR002048) - T[84-112] 1.4 - T[219-247] 2.3 - T[263-288] 86.0 |
| ProSitePatterns |
EF_Hand_1_Ca_BS (IPR018247) - T[93-105] . - T[132-144] . - T[228-240] . - T[269-281] . - T[305-317] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RCN3_HUMAN | 24.662 % | 83.6 | 3.65E-18 |
| CAB45_HUMAN | 38.69 % | 260 | 9.42E-85 |
| RCN2_HUMAN | 29.492 % | 109 | 1.3E-27 |