Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S61.g02194.01.t

Possible name(s)

JMJD4; JMJD6; JMJD8

Gene model

Phmamm.CG.MTP2014.S61.g02194

Location

S61 [45,237 / 48,284]

Sequences

Amino acid sequence

Length: 425

>Phmamm.CG.MTP2014.S61.g02194.01.p
MSSHKSRKRIRIAKKAARPELKGEEGWLGGGYNKWFDLSHQTVKDNVERIDYLQVSHEEF
VEKYERPAKPVVLVNSQKNWQANYKWTLERLKKKYRNQKFKCGEDNDGYSVKMKMKYYID
YLKSTEDDSPLYIFDSNYGEHNKRKQLLEDFEIPSYFKDDLFRYAGEKRRPPYRWFVMGP
KLSGTGIHIDPLGTSAWNALVKKSESPLQQGEAITWFHLIYPRTQSKDWPAEYKPLEILQ
KPGISPYQVKKSESPLQQGEAITWFHLIYPRTQSKDWPAEYKPLEILQKPGETVFVPGGW
WHLVLNLDTAIAVTQNFASVANFQTVWAKTVKGRPKLSHKWIRILRKERPEVAALSEDIC
TANSIESDSSSDSSSSSSDSSSSSSDEEEVQDNHVNGRKRPAANACQTPSKRPKSEGGCQ
DRADR

Nucleotide sequence

Length: 1,278

>Phmamm.CG.MTP2014.S61.g02194.01.t
ATGTCTTCGCATAAATCTCGGAAACGAATTAGAATTGCAAAAAAAGCAGCTCGGCCCGAA
TTGAAGGGTGAGGAGGGTTGGTTGGGGGGTGGTTACAACAAATGGTTTGATCTTTCTCAC
CAAACAGTGAAGGACAATGTTGAGCGGATAGACTATTTGCAGGTATCCCACGAAGAGTTT
GTTGAAAAATACGAAAGGCCTGCCAAGCCTGTGGTTCTTGTGAACTCACAAAAAAACTGG
CAGGCCAATTATAAATGGACCCTTGAGCGATTAAAGAAAAAGTATAGAAACCAGAAATTC
AAATGTGGGGAAGACAACGATGGCTACTCGGTCAAGATGAAAATGAAATATTACATAGAC
TATCTAAAGTCAACTGAAGACGACAGCCCACTCTACATCTTTGACAGCAACTATGGGGAA
CACAACAAGCGAAAACAACTATTGGAGGACTTTGAAATACCCTCCTATTTTAAAGACGAC
CTGTTTAGGTATGCAGGGGAAAAGAGAAGGCCCCCATACAGATGGTTTGTAATGGGGCCA
AAACTATCAGGAACAGGAATCCATATAGACCCGCTAGGAACAAGTGCATGGAACGCTTTG
GTAAAAAAGAGTGAAAGTCCCCTGCAGCAAGGAGAAGCAATCACATGGTTCCATTTGATT
TACCCACGCACTCAAAGCAAAGACTGGCCTGCTGAATACAAACCACTTGAGATTTTACAA
AAGCCTGGTATATCTCCGTATCAGGTAAAAAAGAGTGAAAGTCCCCTGCAGCAAGGAGAA
GCAATCACATGGTTCCATTTGATTTACCCACGCACTCAAAGCAAAGACTGGCCTGCTGAA
TACAAACCACTTGAGATTTTACAAAAGCCTGGTGAAACAGTGTTTGTGCCGGGTGGCTGG
TGGCATCTTGTTCTCAATCTTGACACGGCGATTGCAGTCACACAAAACTTTGCGTCAGTT
GCAAACTTTCAAACAGTGTGGGCCAAAACAGTTAAAGGAAGACCGAAGCTCTCACACAAA
TGGATCAGAATTTTGAGGAAAGAACGTCCAGAGGTGGCAGCATTATCAGAAGACATTTGT
ACTGCAAACTCAATCGAGTCCGACTCATCAAGCGATTCATCTTCGTCGTCCAGTGATTCT
TCATCTAGTTCATCTGATGAAGAGGAGGTTCAAGATAATCATGTAAATGGTCGAAAGAGA
CCTGCTGCTAATGCCTGCCAAACACCGTCAAAGCGACCAAAATCGGAGGGTGGTTGTCAG
GATCGCGCCGATAGATGA

InterProScan

SMART	JmjC_dom (IPR003347) - T[142-334] 5.5E-25
ProSiteProfiles	JmjC_dom (IPR003347) - T[142-334] 28.638
Pfam	JmjC_dom (IPR003347) - T[255-317] 6.1E-12

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
JMJD6_HUMAN	64.426 %	462	1.63E-162