- Transcript 'Phmamm.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S624.g10673.01.t
Possible name(s)
CHDH
Gene model
Location
S624 [35,762 / 39,711]
Amino acid sequence
Length: 560
>Phmamm.CG.MTP2014.S624.g10673.01.p
MLKQAGYVALFAVLLFLIFKRQRSIARETFDDEYDFIVVGGGTTGAAVAGRLSETSAKVL
VLEAGDEDYFDPLTSVPVLGLFSPGTSRDWQYMIEPQKNLCKNMLDNKIRWPRGKILGGS
SSINYMLFVRACKDDLASWVDAGADGWSYEDVLPYYKKSENYIIPELRDSPYHGKNGRVT
VQRTNKIPLSRIFMEAGEELGFPINDDYNGESMDGFAYFHQAIKDGYRQNSATAYLRPVA
YSRQDHLHIVVRARVTKVLFDDKKNAVGVEIERDGKKYTIKAKKEIILSAGAIENPHILM
LSGIGPKKHLQNNKMMSSALEYLLHGTGLIAGSITDSFATIRFNNSRLPQGQLFFGGLEM
DVETFKTMYMTAGNLQPEMYSGAAKEAEEERDGIVYSFYVVSVLSHAKSHGTIRLNMTDP
SNKPIIDPNYFKHPDDIKNMVESMKLVKRLSETKAFKDVKAKPVIMYDTCNALEGDKQFE
CIARHETFTAFHPCCTAKMGKDKMSVVDPKLKVYGVKGLRIADASVMPHDLTGPLQATCY
MIAERLADWIKSDWKLENEI
Nucleotide sequence
Length: 1,683
>Phmamm.CG.MTP2014.S624.g10673.01.t
ATGCTAAAACAAGCAGGCTACGTGGCACTGTTTGCTGTTCTTTTGTTTTTAATTTTTAAA
CGGCAGAGATCAATTGCCAGGGAAACATTCGATGATGAATATGACTTCATTGTTGTTGGA
GGAGGAACTACTGGTGCTGCTGTAGCAGGTCGTCTGAGTGAGACAAGCGCAAAGGTGTTG
GTCCTAGAGGCTGGGGATGAAGACTATTTTGATCCCTTGACAAGTGTGCCAGTTCTCGGG
TTGTTTAGTCCAGGGACATCCAGGGATTGGCAGTACATGATTGAACCACAAAAAAATCTT
TGCAAAAACATGTTGGATAATAAAATAAGGTGGCCAAGGGGCAAGATCCTTGGTGGAAGC
AGCTCAATAAATTACATGCTGTTTGTGCGTGCATGTAAAGATGACTTGGCATCTTGGGTT
GATGCAGGAGCAGATGGATGGTCTTATGAGGATGTGCTCCCATATTACAAAAAATCTGAA
AACTACATAATTCCGGAGTTACGTGACAGTCCATATCATGGAAAAAATGGAAGAGTTACT
GTGCAACGAACCAACAAAATCCCACTGTCAAGGATTTTTATGGAAGCTGGTGAAGAACTG
GGTTTCCCAATTAATGATGATTATAATGGTGAATCTATGGATGGATTTGCATATTTTCAC
CAAGCTATTAAAGATGGGTACAGACAAAACTCTGCTACAGCCTACTTGCGACCAGTAGCT
TACTCAAGACAGGATCATCTACATATTGTTGTACGTGCTCGTGTCACTAAAGTTTTGTTT
GATGACAAAAAGAATGCAGTTGGAGTTGAAATAGAAAGAGATGGCAAGAAATACACAATC
AAAGCTAAAAAAGAAATCATTCTTTCAGCTGGGGCAATAGAAAATCCACATATTTTGATG
CTTTCTGGCATCGGACCTAAGAAACATCTTCAAAACAACAAGATGATGTCTTCAGCATTG
GAATATCTTCTTCACGGAACAGGATTAATTGCAGGAAGCATAACTGATTCGTTTGCAACA
ATTCGATTTAACAACAGTCGTTTACCCCAAGGGCAATTGTTTTTCGGGGGCCTGGAAATG
GATGTTGAAACTTTTAAGACAATGTACATGACAGCAGGAAACCTACAACCAGAGATGTAT
AGCGGTGCAGCTAAAGAGGCAGAGGAGGAAAGAGATGGAATTGTCTATTCTTTCTACGTT
GTCAGTGTGTTGTCACATGCCAAAAGTCATGGGACTATTCGCCTTAACATGACTGACCCA
TCCAACAAACCAATCATTGACCCAAACTACTTTAAGCACCCAGATGACATAAAAAACATG
GTTGAAAGTATGAAGTTAGTTAAACGTCTTTCTGAAACCAAAGCTTTCAAAGATGTCAAA
GCCAAACCTGTGATTATGTATGACACATGCAATGCACTCGAAGGAGATAAACAGTTTGAG
TGCATTGCTCGCCATGAAACATTTACTGCTTTTCATCCATGTTGTACTGCCAAGATGGGA
AAGGACAAGATGTCTGTTGTGGATCCCAAATTAAAGGTTTATGGAGTAAAAGGGCTTCGA
ATTGCCGATGCATCTGTTATGCCACATGATCTCACTGGCCCCCTGCAAGCAACATGTTAT
ATGATCGCTGAAAGACTGGCAGATTGGATCAAATCTGATTGGAAACTTGAAAATGAAATT
TAA
| PIRSF |
GMC_OxRdtase (IPR012132) - T[11-316] 2.2E-82 - T[311-559] 2.4E-50 |
| SUPERFAMILY |
FAD/NAD-bd_sf (IPR036188) - T[29-555] 1.65E-77 |
| Gene3D |
FAD/NAD-bd_sf (IPR036188) - T[33-550] 1.5E-147 |
| Pfam |
GMC_OxRdtase_N (IPR000172) - T[34-312] 1.5E-67 |
| Gene3D |
Glucose_Oxidase_domain_2 (IPR027424) - T[66-230] 1.5E-147 |
| ProSitePatterns |
GMC_OxRdtase_N (IPR000172) - T[114-137] . |
| Pfam |
GMC_OxRtase_C (IPR007867) - T[408-546] 1.3E-36 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CHDH_HUMAN | 32.671 % | 260 | 2.28E-79 |